RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-223	ENST00000508249	NR1I2	O75469	434 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	SEC24A	O95486	1093 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	NPTXR	O95502	500 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	GAP43	P17677	238 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	PSMC3	P17980	439 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	TKT	P29401	623 aa	Known RBP	10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	MPL	P40238	635 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	ME1	P48163	572 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	NOVA1	P51513	510 aa	Known RBP	10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	EPHA5	P54756	1037 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	NCKAP1L	P55160	1127 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	MLLT6	P55198	1093 aa	Predicted RBP	10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	ROR1	Q01973	937 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	FOXC1	Q12948	553 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	ALCAM	Q13740	583 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	MCM6	Q14566	821 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	KYAT1	Q16773	422 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	ZPBP2	Q6X784	338 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	RTL10	Q7L3V2	364 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	HS6ST3	Q8IZP7	471 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	C12orf50	Q8NA57	414 aa	Predicted RBP	10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	SPRYD3	Q8NCJ5	442 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	GAB3	Q8WWW8	586 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	SMARCD2	Q92925	531 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	HVCN1	Q96D96	273 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	CLIC6	Q96NY7	704 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	LRRC3B	Q96PB8	259 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	PLIN2	Q99541	437 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	ST6GALNAC4	Q9H4F1	302 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	ZFP14	Q9HCL3	533 aa		10.03	□□□□□ -0.8
UBE2D3-223	ENST00000508249	CACNA1E	Q15878	2313 aa		10.02	□□□□□ -0.8
UBE2D3-223	ENST00000508249	LNP1	A1A4G5	178 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	MYBPHL	A2RUH7	354 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	SLC38A8	A6NNN8	435 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	EXTL3	O43909	919 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	TRAK2	O60296	914 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	MICAL2	O94851	1124 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	ABLIM3	O94929	683 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	GJA1	P17302	382 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	CTH	P32929	405 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	PXN	P49023	591 aa	Predicted RBP	10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	DNM1	Q05193	864 aa	Known RBP	10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	FCHO2	Q0JRZ9	810 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	PKP1	Q13835	747 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	SOWAHC	Q53LP3	525 aa	Predicted RBP	10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	ARSH	Q5FYA8	562 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	ATF7IP2	Q5U623	682 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	SLC8B1	Q6J4K2	584 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	CEP68	Q76N32	757 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	ABCA7	Q8IZY2	2146 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	TMEM161B	Q8NDZ6	487 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	DEPDC1B	Q8WUY9	529 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	ZCCHC14	Q8WYQ9	949 aa	Known RBP	10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	CCDC34	Q96HJ3	373 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	ZC3H10	Q96K80	434 aa	Known RBP	10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	SPATA32	Q96LK8	384 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	REEP2	Q9BRK0	252 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	MKNK1	Q9BUB5	465 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	SCNM1	Q9BWG6	230 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	PDZD7	Q9H5P4	517 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	TFIP11	Q9UBB9	837 aa	Known RBP	10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	USP25	Q9UHP3	1055 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	BACE2	Q9Y5Z0	518 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	CIT	O14578	2027 aa		10.02	□□□□□ -0.81
UBE2D3-223	ENST00000508249	PLXNB3	Q9ULL4	1909 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	THADA	Q6YHU6	1953 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	SPECC1L-ADORA2A	F8WAN1	911 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249		I3L4J1	428 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	TOM1L1	O75674	476 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	RECQL4	O94761	1208 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	ZIC2	O95409	532 aa	Predicted RBP	10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	PIGR	P01833	764 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	MYL1	P05976	194 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	MCF2	P10911	925 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	PTPN2	P17706	415 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	ANP32A	P39687	249 aa	Known RBP	10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	RESP18	Q5W5W9	173 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	RNF43	Q68DV7	783 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	ADAL	Q6DHV7	355 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	CNNM4	Q6P4Q7	775 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	STXBP4	Q6ZWJ1	553 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	USP49	Q70CQ1	688 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	MFSD6L	Q8IWD5	586 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	CCDC65	Q8IXS2	484 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	MYCT1	Q8N699	235 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	DDX12P	Q92771	950 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	ACO2	Q99798	780 aa	Known RBP	10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	CORO1B	Q9BR76	489 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	EDEM2	Q9BV94	578 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	KIFC3	Q9BVG8	833 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	CCDC94	Q9BW85	323 aa	Predicted RBP	10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	LRRC3	Q9BY71	257 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	OLFML3	Q9NRN5	406 aa		10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.01	□□□□□ -0.81
UBE2D3-223	ENST00000508249	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms