RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 MAPRE1Q15691 268 aaKnown RBP21.47■■□□□ 1.03
USP53-203ENST00000507597 RTP2Q5QGT7 225 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 TMEM130Q8N3G9 435 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 NEK11Q8NG66 645 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 LNX1Q8TBB1 728 aaPredicted RBP21.47■■□□□ 1.03
USP53-203ENST00000507597 IQCDQ96DY2 449 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 ACBD6Q9BR61 282 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 VN1R3Q9BXE9 311 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 BCO2Q9BYV7 579 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 RXFP1Q9HBX9 757 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 PLCB1Q9NQ66 1216 aa21.47■■□□□ 1.03
USP53-203ENST00000507597 DDX43Q9NXZ2 648 aaKnown RBP21.47■■□□□ 1.03
USP53-203ENST00000507597 TIMM13Q9Y5L4 95 aaPredicted RBP21.47■■□□□ 1.03
USP53-203ENST00000507597 A0A1W2PQC6 194 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 NCK2O43639 380 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 NR1I3Q14994 352 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 SPOPLQ6IQ16 392 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 SCARA5Q6ZMJ2 495 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 LIMS2Q7Z4I7 341 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 FMNL3Q8IVF7 1028 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 DEFB123Q8N688 67 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 LMO3Q8TAP4 145 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 RBSNQ9H1K0 784 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 NSUN3Q9H649 340 aaKnown RBP21.46■■□□□ 1.03
USP53-203ENST00000507597 APOBEC3GQ9HC16 384 aaKnown RBP21.46■■□□□ 1.03
USP53-203ENST00000507597 UBE2TQ9NPD8 197 aaPredicted RBP21.46■■□□□ 1.03
USP53-203ENST00000507597 CDH9Q9ULB4 789 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 MAFFQ9ULX9 164 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 BARX2Q9UMQ3 279 aaPredicted RBP21.46■■□□□ 1.03
USP53-203ENST00000507597 POLIQ9UNA4 740 aa21.46■■□□□ 1.03
USP53-203ENST00000507597 C2orf71A6NGG8 1288 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 EPOPA6NHQ4 379 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 A8MXQ7 604 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 RFXAPO00287 272 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 GABRDO14764 452 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 SRGAP2BP0DMP2 458 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 SLC9A1P19634 815 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 IGFBP4P22692 258 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 IGFBP6P24592 240 aaPredicted RBP21.45■■□□□ 1.02
USP53-203ENST00000507597 DNAJB1P25685 340 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 KLRC2P26717 231 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 SYCP1Q15431 976 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 APTXQ7Z2E3 356 aaKnown RBP21.45■■□□□ 1.02
USP53-203ENST00000507597 TATDN2Q93075 761 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 FAM161BQ96MY7 647 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 NUP58Q9BVL2 599 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 LSM14BQ9BX40 385 aaKnown RBP21.45■■□□□ 1.02
USP53-203ENST00000507597 TLE6Q9H808 572 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.45■■□□□ 1.029e-7■■■■■ 159.9
USP53-203ENST00000507597 IFNKQ9P0W0 207 aa21.45■■□□□ 1.02
USP53-203ENST00000507597 RANBP2P49792 3224 aaKnown RBP21.45■■□□□ 1.02
USP53-203ENST00000507597 LILRB3O75022 631 aa21.44■■□□□ 1.02
USP53-203ENST00000507597 ASPAP45381 313 aa21.44■■□□□ 1.02
USP53-203ENST00000507597 NFE2Q16621 373 aaPredicted RBP21.44■■□□□ 1.02
USP53-203ENST00000507597 TPGS2Q68CL5 300 aa21.44■■□□□ 1.02
USP53-203ENST00000507597 PRSS55Q6UWB4 352 aaPredicted RBP21.44■■□□□ 1.02
USP53-203ENST00000507597 NT5C1AQ9BXI3 368 aa21.44■■□□□ 1.02
USP53-203ENST00000507597 SMYD3Q9H7B4 428 aa21.44■■□□□ 1.02
USP53-203ENST00000507597 FBXL5Q9UKA1 691 aa21.44■■□□□ 1.02
USP53-203ENST00000507597 STXBP5LQ9Y2K9 1186 aa21.44■■□□□ 1.02
USP53-203ENST00000507597 WEE2P0C1S8 567 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 CPB1P15086 417 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 ELF1P32519 619 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 FXR1P51114 621 aaKnown RBP eCLIP21.43■■□□□ 1.02
USP53-203ENST00000507597 INCA1Q0VD86 236 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 KCNMA1Q12791 1236 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 CAMK1Q14012 370 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 KLHDC7AQ5VTJ3 777 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 SCARA3Q6AZY7 606 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 SLC8B1Q6J4K2 584 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 SARM1Q6SZW1 724 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 GAS2L3Q86XJ1 694 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 C2orf15Q8WU43 125 aaKnown RBP21.43■■□□□ 1.02
USP53-203ENST00000507597 B3GALT6Q96L58 329 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 NAP1L5Q96NT1 182 aaPredicted RBP21.43■■□□□ 1.02
USP53-203ENST00000507597 KLHL5Q96PQ7 755 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 TRIM5Q9C035 493 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 CISHQ9NSE2 258 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 CDY1Q9Y6F8 540 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 SCN1AP35498 2009 aa21.43■■□□□ 1.02
USP53-203ENST00000507597 TBC1D4O60343 1298 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 CSPG5O95196 566 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 CNPP09543 421 aaKnown RBP21.42■■□□□ 1.02
USP53-203ENST00000507597 CD58P19256 250 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 OR1D2P34982 312 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 IRS1P35568 1242 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 CDH8P55286 799 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 RAB33AQ14088 237 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 PHLDB3Q6NSJ2 640 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 C4orf50Q6ZRC1 276 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 RTL10Q7L3V2 364 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 RRAGAQ7L523 313 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 CACNA2D4Q7Z3S7 1137 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 KBTBD7Q8WVZ9 684 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 AUTS2Q8WXX7 1259 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 MRPL45Q9BRJ2 306 aaKnown RBP21.42■■□□□ 1.02
USP53-203ENST00000507597 DNAJC12Q9UKB3 198 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 KIAA1257Q9ULG3 409 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 PCDHB4Q9Y5E5 795 aa21.42■■□□□ 1.02
USP53-203ENST00000507597 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms