RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 SYT13Q7L8C5 426 aa15.15■□□□□ 0.02
DDR1-260ENST00000507533 CYP2U1Q7Z449 544 aa15.15■□□□□ 0.02
DDR1-260ENST00000507533 ITIH5Q86UX2 942 aa15.15■□□□□ 0.02
DDR1-260ENST00000507533 RPLP0P6Q8NHW5 317 aa15.15■□□□□ 0.02
DDR1-260ENST00000507533 EBF3Q9H4W6 596 aa15.15■□□□□ 0.02
DDR1-260ENST00000507533 PTPRHQ9HD43 1115 aa15.15■□□□□ 0.02
DDR1-260ENST00000507533 OR6C75A6NL08 312 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 M0QZQ0 153 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 MEFVO15553 781 aaPredicted RBP15.14■□□□□ 0.01
DDR1-260ENST00000507533 EPB41L2O43491 1005 aaKnown RBP15.14■□□□□ 0.01
DDR1-260ENST00000507533 NEMFO60524 1076 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 SOAT2O75908 522 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 CDKL5O76039 1030 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 FBXO43Q4G163 708 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 USP39Q53GS9 565 aaKnown RBP15.14■□□□□ 0.01
DDR1-260ENST00000507533 C19orf48Q6RUI8 117 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 USP37Q86T82 979 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 C11orf74Q86VG3 221 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 ATAD1Q8NBU5 361 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 MTMR9Q96QG7 549 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 TCHPQ9BT92 498 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 POLR3CQ9BUI4 534 aaPredicted RBP15.14■□□□□ 0.01
DDR1-260ENST00000507533 SLC46A2Q9BY10 475 aa15.14■□□□□ 0.01
DDR1-260ENST00000507533 SMG1Q96Q15 3661 aaKnown RBP15.14■□□□□ 0.01
DDR1-260ENST00000507533 SPAARA0A1B0GVQ0 90 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 MTMR11A4FU01 709 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 DTNBO60941 627 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 MCF2P10911 925 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 CDC25CP30307 473 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 KRT2P35908 639 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 TTC9BQ8N6N2 239 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 PIGKQ92643 395 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 KIFAP3Q92845 792 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 ACDQ96AP0 544 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 GCNAQ96QF7 691 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 P2RY13Q9BPV8 354 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 MRPL4Q9BYD3 311 aaKnown RBP15.13■□□□□ 0.01
DDR1-260ENST00000507533 TUBGCP4Q9UGJ1 667 aa15.13■□□□□ 0.01
DDR1-260ENST00000507533 CCDC169A6NNP5 214 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 WNT7AO00755 349 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 HARSP12081 509 aaKnown RBP15.12■□□□□ 0.01
DDR1-260ENST00000507533 ARSAP15289 507 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 U2AF2P26368 475 aaKnown RBP eCLIP15.12■□□□□ 0.01
DDR1-260ENST00000507533 DHPSP49366 369 aaPredicted RBP15.12■□□□□ 0.01
DDR1-260ENST00000507533 SIM1P81133 766 aaPredicted RBP15.12■□□□□ 0.01
DDR1-260ENST00000507533 LMAN2Q12907 356 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 NAIF1Q69YI7 327 aaPredicted RBP15.12■□□□□ 0.01
DDR1-260ENST00000507533 PDZD3Q86UT5 571 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 PROSER1Q86XN7 944 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 CMTM8Q8IZV2 173 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 TMEM130Q8N3G9 435 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 TSTD1Q8NFU3 115 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 TNFRSF25Q93038 417 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 EXOC4Q96A65 974 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 LPIN3Q9BQK8 851 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 TARS2Q9BW92 718 aaKnown RBP15.12■□□□□ 0.01
DDR1-260ENST00000507533 TPSD1Q9BZJ3 242 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 ZSWIM6Q9HCJ5 1215 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 GPSM3Q9Y4H4 160 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 STK36Q9NRP7 1315 aa15.12■□□□□ 0.01
DDR1-260ENST00000507533 EML5Q05BV3 1969 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 EIF5BO60841 1220 aaKnown RBP15.11■□□□□ 0.01
DDR1-260ENST00000507533 ZIC2O95409 532 aaPredicted RBP15.11■□□□□ 0.01
DDR1-260ENST00000507533 BCKDHBP21953 392 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 RDXP35241 583 aaKnown RBP15.11■□□□□ 0.01
DDR1-260ENST00000507533 MAPK8P45983 427 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 SCRN1Q12765 414 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 PSMD2Q13200 908 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 MYBPC2Q14324 1141 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 VEPH1Q14D04 833 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 SLC10A6Q3KNW5 377 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 ARMCX5Q6P1M9 558 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 DSTYKQ6XUX3 929 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 TMEM60Q9H2L4 133 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 IL21Q9HBE4 155 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 BRMS1Q9HCU9 246 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 EVLQ9UI08 416 aaPredicted RBP15.11■□□□□ 0.01
DDR1-260ENST00000507533 TBX20Q9UMR3 447 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 CCL26Q9Y258 94 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 CYP46A1Q9Y6A2 500 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 PHLPP2Q6ZVD8 1323 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 FREM2Q5SZK8 3169 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 TRIP11Q15643 1979 aa15.11■□□□□ 0.01
DDR1-260ENST00000507533 FAM221BA6H8Z2 402 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 H0Y626 953 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 ABLIM1O14639 778 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 TRIM16O95361 564 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 LARGE1O95461 756 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 SEC24BO95487 1268 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 CAPNS1P04632 268 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 PROZP22891 400 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 RPA1P27694 616 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 GJA4P35212 333 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 AVPR1AP37288 418 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 TUFMP49411 452 aaKnown RBP15.1■□□□□ 0.01
DDR1-260ENST00000507533 PEX3P56589 373 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 BFSP1Q12934 665 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 TAF12Q16514 161 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 SEZ6Q53EL9 994 aa15.1■□□□□ 0.01
DDR1-260ENST00000507533 TRIM61Q5EBN2 209 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms