RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 DNAJB7Q7Z6W7 309 aaPredicted RBP12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 METTL23Q86XA0 190 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 GPIHBP1Q8IV16 184 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 MFSD6LQ8IWD5 586 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 YAF2Q8IY57 180 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 CSGALNACT1Q8TDX6 532 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 ATRIPQ8WXE1 791 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 PSMG2Q969U7 264 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 E2F7Q96AV8 911 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 CLIC6Q96NY7 704 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 LPIN3Q9BQK8 851 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 PYM1Q9BRP8 204 aaKnown RBP12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 MKNK1Q9BUB5 465 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 ZCWPW1Q9H0M4 648 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 CHRDQ9H2X0 955 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 ATXN3LQ9H3M9 355 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 ZSCAN32Q9NX65 697 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 TBC1D7Q9P0N9 293 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 DSEQ9UL01 958 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 PCDHGA2Q9Y5H1 932 aa12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 SRPRBQ9Y5M8 271 aaKnown RBP12.48□□□□□ -0.41
HMGCS1-204ENST00000507293 F5P12259 2224 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 EP300Q09472 2414 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 TULP1O00294 542 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 LILRB5O75023 590 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 GAP43P17677 238 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 ATF6P18850 670 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 CCNE1P24864 410 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 ADSSP30520 456 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 TXLNAP40222 546 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 POU5F1Q01860 360 aaKnown RBP12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 CEBPZQ03701 1054 aaKnown RBP12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 KCNA1Q09470 495 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 VEPH1Q14D04 833 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 GPR158Q5T848 1215 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 WSCD1Q658N2 575 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 GAREM2Q75VX8 874 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 ERMP1Q7Z2K6 904 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 ITIH5Q86UX2 942 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 ARID3BQ8IVW6 561 aaPredicted RBP12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 ZBTB44Q8NCP5 570 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 FAM200AQ8TCP9 573 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 NELL1Q92832 810 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 RMDN1Q96DB5 314 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 STRA6Q9BX79 667 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 MRPL44Q9H9J2 332 aaKnown RBP12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 LMAN1LQ9HAT1 526 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 NCDNQ9UBB6 729 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 HSFX1Q9UBD0 423 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 SEL1LQ9UBV2 794 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 EXOC7Q9UPT5 735 aa12.47□□□□□ -0.41
HMGCS1-204ENST00000507293 VPS13AQ96RL7 3174 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 SLC38A8A6NNN8 435 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 CHADO15335 359 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 IL18RAPO95256 599 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 GCNT3O95395 438 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 FGF19O95750 216 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 SYT1P21579 422 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 SOX9P48436 509 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 TUFMP49411 452 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 CASP5P51878 434 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 WNT7BP56706 349 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 CYP4F8P98187 520 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 FCHO2Q0JRZ9 810 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 POSTNQ15063 836 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 SV2CQ496J9 727 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 ARHGAP15Q53QZ3 475 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 L1TD1Q5T7N2 865 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 SV2BQ7L1I2 683 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 THEM5Q8N1Q8 247 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 ZSWIM2Q8NEG5 633 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 DNAJC19Q96DA6 116 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 SAAL1Q96ER3 474 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 BORCS6Q96GS4 357 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 MSANTD3Q96H12 275 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 ZNF560Q96MR9 790 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 ACCSQ96QU6 501 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 FAM213AQ9BRX8 229 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 IER2Q9BTL4 223 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 IL21Q9HBE4 155 aa12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 ABI2Q9NYB9 513 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 SMG5Q9UPR3 1016 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-204ENST00000507293 KPNA7A9QM74 516 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 DPYSL4O14531 572 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 PRAMEF12O95522 483 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 HAPLN1P10915 354 aaPredicted RBP12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 CHRNB1P11230 501 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 TDGF1P13385 188 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 IDEP14735 1019 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 POLR2BP30876 1174 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 STAT6P42226 847 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 CCR3P51677 355 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 KPNA1P52294 538 aaPredicted RBP12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 CCDC73Q6ZRK6 1079 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 LRRTM3Q86VH5 581 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 NT5DC4Q86YG4 428 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 BRSK2Q8IWQ3 736 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 TTC8Q8TAM2 541 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 SPPL2BQ8TCT7 592 aa12.45□□□□□ -0.42
HMGCS1-204ENST00000507293 GIPC2Q8TF65 315 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms