RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 FCARP24071 287 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 WEE1P30291 646 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 CDC25CP30307 473 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 CCR2P41597 374 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 TSPY1Q01534 308 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 TAF12Q16514 161 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 CNNM4Q6P4Q7 775 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 TPRG1Q6ZUI0 275 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 DNAJB7Q7Z6W7 309 aaPredicted RBP15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 YAF2Q8IY57 180 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 TMEM86AQ8N2M4 240 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 ZSCAN18Q8TBC5 510 aaPredicted RBP15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 KCNG4Q8TDN1 519 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 CLDN23Q96B33 292 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 TCEAL4Q96EI5 215 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 FAM213AQ9BRX8 229 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 FOXQ1Q9C009 403 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 KBTBD4Q9NVX7 518 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 PPEF2O14830 753 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 EIF3DO15371 548 aaKnown RBP eCLIP15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 HUS1O60921 280 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 MOSPD3O75425 235 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 OR4Q2P0C623 313 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 RBP5P82980 135 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 TFAMQ00059 246 aaKnown RBP15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 MYL7Q01449 175 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 PPP2R5DQ14738 602 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 TEAD2Q15562 447 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 ASCL5Q7RTU5 278 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 TMC8Q8IU68 726 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 EFCAB13Q8IY85 973 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 HS6ST3Q8IZP7 471 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 GPD1LQ8N335 351 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 PDILTQ8N807 584 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 ATAD1Q8NBU5 361 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 SHKBP1Q8TBC3 707 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 FAM200AQ8TCP9 573 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 LRRC3Q9BY71 257 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 DNAJC25Q9H1X3 360 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 TBC1D7Q9P0N9 293 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 CFAP45Q9UL16 551 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 RIF1Q5UIP0 2472 aaKnown RBP15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 MIA3Q5JRA6 1907 aa15.55■□□□□ 0.08
HMGCS1-203ENST00000507004 UBE4BO95155 1302 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 ZNF233A6NK53 670 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 TISP43B9A030 160 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 DPYSL4O14531 572 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 CHADO15335 359 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 VNN2O95498 520 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 LMNAP02545 664 aaKnown RBP15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 TMEM191BP0C7N4 346 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 GDI1P31150 447 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 PLCB2Q00722 1185 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 MYO1EQ12965 1108 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 MGAT5BQ3V5L5 792 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 SLC39A12Q504Y0 691 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 MAMSTRQ6ZN01 415 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 DPH6Q7L8W6 267 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 ST13P5Q8NFI4 369 aaPredicted RBP15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 OR10T2Q8NGX3 314 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 CSGALNACT1Q8TDX6 532 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 LEO1Q8WVC0 666 aaPredicted RBP15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 ANKRD36BP1Q96IX9 119 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 SEPT5Q99719 369 aaPredicted RBP15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 ACBD6Q9BR61 282 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 FAM126AQ9BYI3 521 aaPredicted RBP15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 PANK2Q9BZ23 570 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 PLA2G2FQ9BZM2 168 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 TRIM9Q9C026 710 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 ATXN3LQ9H3M9 355 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 C8orf33Q9H7E9 229 aaPredicted RBP15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 ZNF334Q9HCZ1 680 aaPredicted RBP15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 ABCB6Q9NP58 842 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 SPATA6Q9NWH7 488 aaPredicted RBP15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 FAM13BQ9NYF5 915 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 CGNQ9P2M7 1197 aaKnown RBP15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 SLC27A5Q9Y2P5 690 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 PCDHB5Q9Y5E4 795 aa15.54■□□□□ 0.08
HMGCS1-203ENST00000507004 ANK1P16157 1881 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 A0A1W2PRU2 124 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 HEPACAM2A8MVW5 462 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 SP9P0CG40 484 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 DDX6P26196 483 aaKnown RBP eCLIP15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 GABRR2P28476 465 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 PCSK1P29120 753 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 POLR2BP30876 1174 aaKnown RBP15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 LHX1P48742 406 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 KCNA1Q09470 495 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 FCHO2Q0JRZ9 810 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 E2F4Q16254 413 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 ARHGAP29Q52LW3 1261 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 WSCD1Q658N2 575 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 VITQ6UXI7 678 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 TOP6BLQ8N6T0 577 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 SAAL1Q96ER3 474 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 CRISPLD1Q9H336 500 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 TASP1Q9H6P5 420 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 HEBP1Q9NRV9 189 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
HMGCS1-203ENST00000507004 GDAP2Q9NXN4 497 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms