RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 STX10O60499 249 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 ATP2C2O75185 946 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 CAVIN2O95810 425 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 SOD2P04179 222 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 RB1P06400 928 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 SPATA31D3P0C874 917 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 PNMA6AP0CW24 399 aaPredicted RBP9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 FGFR3P22607 806 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 IGFBP4P22692 258 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 PPM1AP35813 382 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 FXR1P51114 621 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 MYO1EQ12965 1108 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 EXOC3L4Q17RC7 722 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 SV2CQ496J9 727 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 ZNF667Q5HYK9 610 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 KIAA0319Q5VV43 1072 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 KIAA1841Q6NSI8 718 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 PHLDB3Q6NSJ2 640 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 DPY19L2P1Q6NXN4 242 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 GBP6Q6ZN66 633 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 SPATA31D4Q6ZUB0 917 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 NLRC5Q86WI3 1866 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 RNF168Q8IYW5 571 aaPredicted RBP9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 MICALL1Q8N3F8 863 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 KBTBD7Q8WVZ9 684 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 MYLIPQ8WY64 445 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 PCMTD1Q96MG8 357 aaPredicted RBP9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 ZNF560Q96MR9 790 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 KREMEN1Q96MU8 473 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 TTPALQ9BTX7 342 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 C11orf84Q9BUA3 381 aaPredicted RBP9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 PLVAPQ9BX97 442 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 XPO4Q9C0E2 1151 aaKnown RBP9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 ZBP1Q9H171 429 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 PLXNA4Q9HCM2 1894 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 UBE2TQ9NPD8 197 aaPredicted RBP9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 ENTPD7Q9NQZ7 604 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 HMGXB4Q9UGU5 601 aa9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 SF3B1O75533 1304 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCAMP1-202ENST00000506858 SPTBN5Q9NRC6 3674 aaKnown RBP9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 VWA8A3KMH1 1905 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 FAM170AA1A519 330 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 M0QZQ0 153 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 HUS1O60921 280 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 ASPAP45381 313 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 UBASH3AP57075 661 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 TNNC1P63316 161 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 ENPEPQ07075 957 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 NR1I3Q14994 352 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 ARHGAP44Q17R89 818 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 USP41Q3LFD5 358 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 ZNF394Q53GI3 561 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 ZNF697Q5TEC3 545 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 PALB2Q86YC2 1186 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 PPM1KQ8N3J5 372 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 DEFB123Q8N688 67 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 ANKRD20A12PQ8NF67 263 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 OR10T2Q8NGX3 314 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 LNX1Q8TBB1 728 aaPredicted RBP9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 FEZF2Q8TBJ5 459 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 TWNKQ96RR1 684 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 HERC2P3Q9BVR0 1158 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 DPEP3Q9H4B8 488 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 TLR9Q9NR96 1032 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 CHST7Q9NS84 486 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 FAM207AQ9NSI2 230 aaPredicted RBP9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 GDAP2Q9NXN4 497 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 PUF60Q9UHX1 559 aaKnown RBP9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 LHX6Q9UPM6 363 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 SIK3Q9Y2K2 1263 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 BRWD1Q9NSI6 2320 aa9.46□□□□□ -0.89
SCAMP1-202ENST00000506858 A0A1B0GTH6 734 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 TRAPPC3O43617 180 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 LILRB3O75022 631 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 NOL4O94818 638 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 CNPP09543 421 aaKnown RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 CTSAP10619 480 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 ATICP31939 592 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 SSTR3P32745 418 aaPredicted RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 PNPLA4P41247 253 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 GLUD2P49448 558 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 PSMC1P62191 440 aaKnown RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 TPM4P67936 248 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 DSG1Q02413 1049 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 PTPN14Q15678 1187 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 CCDC85BQ15834 202 aaPredicted RBP9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 PSMD5Q16401 504 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 CTXN3Q4LDR2 81 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 WDR44Q5JSH3 913 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 OVOS1Q6IE37 1185 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 TRIM65Q6PJ69 517 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 LRRTM3Q86VH5 581 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 ADGRF2Q8IZF7 708 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 APPL2Q8NEU8 664 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 OR6B3Q8NGW1 331 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 PPM1EQ8WY54 764 aa9.45□□□□□ -0.9
SCAMP1-202ENST00000506858 KHSRPQ92945 711 aaKnown RBP eCLIP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms