RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 PDCL2Q8N4E4 241 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 ATAD1Q8NBU5 361 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 FGF13Q92913 245 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 PBXIP1Q96AQ6 731 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 MFSD14AQ96MC6 490 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 CGRRF1Q99675 332 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 ZCWPW1Q9H0M4 648 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 CRISPLD1Q9H336 500 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 GDAP2Q9NXN4 497 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 L1RE1Q9UN81 338 aa16.72■□□□□ 0.27
MED28-204ENST00000506409 MRPS23Q9Y3D9 190 aaKnown RBP16.72■□□□□ 0.27
MED28-204ENST00000506409 NR3C1P04150 777 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 PLD1Q13393 1074 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 PNOCQ13519 176 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 SNW1Q13573 536 aaKnown RBP16.71■□□□□ 0.27
MED28-204ENST00000506409 TRAPPC11Q7Z392 1133 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 SLC9A9Q8IVB4 645 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 TMEM86AQ8N2M4 240 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 ENGASEQ8NFI3 743 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 TMEM174Q8WUU8 243 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 RSAD2Q8WXG1 361 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 ING5Q8WYH8 240 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 NXPE3Q969Y0 559 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 ASIC4Q96FT7 647 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 HPDLQ96IR7 371 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 ZNF512Q96ME7 567 aaPredicted RBP16.71■□□□□ 0.27
MED28-204ENST00000506409 AVENQ9NQS1 362 aaPredicted RBP16.71■□□□□ 0.27
MED28-204ENST00000506409 DMAC2Q9NW81 257 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 CEP72Q9P209 647 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 MAPK8IP1Q9UQF2 711 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 SLC27A5Q9Y2P5 690 aa16.71■□□□□ 0.27
MED28-204ENST00000506409 ANHXE9PGG2 379 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 CALUO43852 315 aaPredicted RBP16.7■□□□□ 0.26
MED28-204ENST00000506409 ALDH1A3P47895 512 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 EPHB3P54753 998 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 TSPY1Q01534 308 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 SMARCB1Q12824 385 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 HTR4Q13639 388 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 SLC5A9Q2M3M2 681 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 CYP4A22Q5TCH4 519 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 PDZD4Q76G19 769 aaPredicted RBP16.7■□□□□ 0.26
MED28-204ENST00000506409 BMP8AQ7Z5Y6 402 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 NPAS3Q8IXF0 933 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 ADGRF2Q8IZF7 708 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 TTC9BQ8N6N2 239 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 TOP6BLQ8N6T0 577 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 GZF1Q9H116 711 aaPredicted RBP16.7■□□□□ 0.26
MED28-204ENST00000506409 DDX43Q9NXZ2 648 aaKnown RBP16.7■□□□□ 0.26
MED28-204ENST00000506409 HSFX1Q9UBD0 423 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 RAPGEFL1Q9UHV5 662 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 DUSP12Q9UNI6 340 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 HCN4Q9Y3Q4 1203 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 NUMBLQ9Y6R0 609 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 NOTCH4Q99466 2003 aa16.7■□□□□ 0.26
MED28-204ENST00000506409 ZNF197O14709 1029 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 CASP4P49662 377 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 CDR1P51861 262 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 MYL7Q01449 175 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 CEP135Q66GS9 1140 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 LRRTM3Q86VH5 581 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 DCP1BQ8IZD4 617 aaKnown RBP16.69■□□□□ 0.26
MED28-204ENST00000506409 HS6ST3Q8IZP7 471 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 GUF1Q8N442 669 aaKnown RBP16.69■□□□□ 0.26
MED28-204ENST00000506409 LEMD2Q8NC56 503 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 ST13P5Q8NFI4 369 aaPredicted RBP16.69■□□□□ 0.26
MED28-204ENST00000506409 SPATA18Q8TC71 538 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 C2orf15Q8WU43 125 aaKnown RBP16.69■□□□□ 0.26
MED28-204ENST00000506409 SEPT5Q99719 369 aaPredicted RBP16.69■□□□□ 0.26
MED28-204ENST00000506409 ASAH2Q9NR71 780 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 RMND1Q9NWS8 449 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 GDE1Q9NZC3 331 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 TRAF3IP3Q9Y228 551 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 FRMD4BQ9Y2L6 1034 aa16.69■□□□□ 0.26
MED28-204ENST00000506409 SOAT2O75908 522 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 CST3P01034 146 aaPredicted RBP16.68■□□□□ 0.26
MED28-204ENST00000506409 MYL4P12829 197 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 CEBPBP17676 345 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 NR2F2P24468 414 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 ANP32AP39687 249 aaKnown RBP16.68■□□□□ 0.26
MED28-204ENST00000506409 LHX1P48742 406 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 TUFMP49411 452 aaKnown RBP16.68■□□□□ 0.26
MED28-204ENST00000506409 TRPC3Q13507 836 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 SOWAHAQ2M3V2 549 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 MGAT5BQ3V5L5 792 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 PRSS36Q5K4E3 855 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 PARM1Q6UWI2 310 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 MTSS1LQ765P7 747 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 DPH6Q7L8W6 267 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 SUGP1Q8IWZ8 645 aaKnown RBP16.68■□□□□ 0.26
MED28-204ENST00000506409 SLC44A3Q8N4M1 653 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 FBXL6Q8N531 539 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 SPPL2BQ8TCT7 592 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 PLEKHO2Q8TD55 490 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 PARD3BQ8TEW8 1205 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 ZNF516Q92618 1163 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 FGF14Q92915 247 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 TCEAL4Q96EI5 215 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 MCRS1Q96EZ8 462 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 TIGD1Q96MW7 591 aa16.68■□□□□ 0.26
MED28-204ENST00000506409 MMS19Q96T76 1030 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms