RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 CYP4F11Q9HBI6 524 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 KIAA1468Q9P260 1216 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 USTQ9Y2C2 406 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 CLUHO75153 1309 aa17.93■□□□□ 0.46
SNCA-209ENST00000506244 C2orf16Q68DN1 1984 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 WEE2P0C1S8 567 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 CCNE1P24864 410 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 LHX1P48742 406 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 TNNC1P63316 161 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 ADCY1Q08828 1119 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 PLD1Q13393 1074 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 FOXR2Q6PJQ5 311 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 OTOP3Q7RTS5 596 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 DCP1BQ8IZD4 617 aaKnown RBP17.92■□□□□ 0.46
SNCA-209ENST00000506244 ELMOD1Q8N336 334 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 PDCL2Q8N4E4 241 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 ACSF2Q96CM8 615 aaPredicted RBP17.92■□□□□ 0.46
SNCA-209ENST00000506244 CLSTN2Q9H4D0 955 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 WDR6Q9NNW5 1121 aaKnown RBP17.92■□□□□ 0.46
SNCA-209ENST00000506244 CDH22Q9UJ99 828 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 L1RE1Q9UN81 338 aa17.92■□□□□ 0.46
SNCA-209ENST00000506244 LOC730098B7Z3J9 87 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 BIN1O00499 593 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 STX10O60499 249 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 PCSK1P29120 753 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 NCOA4Q13772 614 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 CAMK4Q16566 473 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 ZNF699Q32M78 642 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 TDRD10Q5VZ19 366 aaKnown RBP17.91■□□□□ 0.46
SNCA-209ENST00000506244 ISM2Q6H9L7 571 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 OR10T2Q8NGX3 314 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 PLEKHO2Q8TD55 490 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 C2orf15Q8WU43 125 aaKnown RBP17.91■□□□□ 0.46
SNCA-209ENST00000506244 IMPG2Q9BZV3 1241 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 ZCWPW1Q9H0M4 648 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 NUP62CLQ9H1M0 184 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 LMBRD1Q9NUN5 540 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 HSFX1Q9UBD0 423 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 POLIQ9UNA4 740 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 INSL5Q9Y5Q6 135 aa17.91■□□□□ 0.46
SNCA-209ENST00000506244 CCL16O15467 120 aa17.9■□□□□ 0.46
SNCA-209ENST00000506244 P4HA1P13674 534 aa17.9■□□□□ 0.46
SNCA-209ENST00000506244 ZACNQ401N2 412 aa17.9■□□□□ 0.46
SNCA-209ENST00000506244 KLHL10Q6JEL2 608 aa17.9■□□□□ 0.46
SNCA-209ENST00000506244 RNF19BQ6ZMZ0 732 aa17.9■□□□□ 0.46
SNCA-209ENST00000506244 ZC3H3Q8IXZ2 948 aaKnown RBP17.9■□□□□ 0.46
SNCA-209ENST00000506244 PLCD3Q8N3E9 789 aa17.9■□□□□ 0.46
SNCA-209ENST00000506244 ZNF516Q92618 1163 aa17.9■□□□□ 0.46
SNCA-209ENST00000506244 TAF4BQ92750 862 aa17.9■□□□□ 0.46
SNCA-209ENST00000506244 MMS19Q96T76 1030 aa17.9■□□□□ 0.46
SNCA-209ENST00000506244 ACBD6Q9BR61 282 aa17.9■□□□□ 0.46
SNCA-209ENST00000506244 VRTNQ9H8Y1 702 aa17.9■□□□□ 0.46
SNCA-209ENST00000506244 DDX43Q9NXZ2 648 aaKnown RBP17.9■□□□□ 0.46
SNCA-209ENST00000506244 MTMR11A4FU01 709 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 C4BPAP04003 597 aaKnown RBP17.89■□□□□ 0.45
SNCA-209ENST00000506244 FAM163BP0C2L3 166 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 OR4Q2P0C623 313 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 GTF2H1P32780 548 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 PIK3CAP42336 1068 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 DLG4P78352 724 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 PAK1Q13153 545 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 NFE2Q16621 373 aaPredicted RBP17.89■□□□□ 0.45
SNCA-209ENST00000506244 SOWAHAQ2M3V2 549 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 WDR72Q3MJ13 1102 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 SLC39A12Q504Y0 691 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 ANKRD40Q6AI12 368 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 CCDC150Q8NCX0 1101 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 SPPL2BQ8TCT7 592 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 NELFBQ8WX92 580 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 CEP63Q96MT8 703 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 PGLYRP2Q96PD5 576 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 CTNND2Q9UQB3 1225 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 YIPF1Q9Y548 306 aa17.89■□□□□ 0.45
SNCA-209ENST00000506244 TRIM49BA6NDI0 452 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 TACC1O75410 805 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 CD44P16070 742 aaKnown RBP17.88■□□□□ 0.45
SNCA-209ENST00000506244 SP100P23497 879 aaPredicted RBP17.88■□□□□ 0.45
SNCA-209ENST00000506244 PMS1P54277 932 aaKnown RBP17.88■□□□□ 0.45
SNCA-209ENST00000506244 MYL6P60660 151 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 SGSM1Q2NKQ1 1148 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 ZNF667Q5HYK9 610 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 IQCEQ6IPM2 695 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 SV2AQ7L0J3 742 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 LIMS2Q7Z4I7 341 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 ZDHHC14Q8IZN3 488 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 RTP3Q9BQQ7 232 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 XYLT2Q9H1B5 865 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 METTL14Q9HCE5 456 aaKnown RBP17.88■□□□□ 0.45
SNCA-209ENST00000506244 TMEM8AQ9HCN3 771 aa17.88■□□□□ 0.45
SNCA-209ENST00000506244 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNCA-209ENST00000506244 C2CD4DB7Z1M9 353 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 PPP1R3GB7ZBB8 358 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 GABRDO14764 452 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 SEC24AO95486 1093 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 MBD3O95983 291 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 CST3P01034 146 aaPredicted RBP17.87■□□□□ 0.45
SNCA-209ENST00000506244 TRIM49P0CI25 452 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 TRIM49CP0CI26 452 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 BMP6P22004 513 aa17.87■□□□□ 0.45
SNCA-209ENST00000506244 WARSP23381 471 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms