RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 NRLP54845 237 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 ADAM17P78536 824 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 HTRA3P83110 453 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 ZNF252P-AS1Q0IIN9 211 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 KIF22Q14807 665 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 TMEM214Q6NUQ4 689 aaKnown RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 MAP4K3Q8IVH8 894 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 SMAP1Q8IYB5 467 aaPredicted RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 PPM1KQ8N3J5 372 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 SDR16C5Q8N3Y7 309 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 ZSCAN1Q8NBB4 408 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 EHBP1Q8NDI1 1231 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 PORCNQ9H237 461 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 GOLPH3Q9H4A6 298 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 ZNF576Q9H609 170 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 TOPORSQ9NS56 1045 aaPredicted RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 APEX2Q9UBZ4 518 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 DNAI1Q9UI46 699 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 PLXNA3P51805 1871 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 VWA8A3KMH1 1905 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 ABHD14A-ACY1A0A1B0GW23 586 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 MSCO60682 206 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 ATE1O95260 518 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 SYF2O95926 243 aaKnown RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 EIF2AK2P19525 551 aaKnown RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 COPB2P35606 906 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 FKBP3Q00688 224 aaKnown RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 ZNF267Q14586 743 aaPredicted RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 TNIP1Q15025 636 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 PTPN14Q15678 1187 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 ZNF792Q3KQV3 632 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 HSDL1Q3SXM5 330 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 OVOS1Q6IE37 1185 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 NKAPQ8N5F7 415 aaKnown RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 OR8K1Q8NGG5 319 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 NELL1Q92832 810 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 CLIP3Q96DZ5 547 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 SELENOOQ9BVL4 669 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 NEUROG2Q9H2A3 272 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 LZTFL1Q9NQ48 299 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 GPN3Q9UHW5 284 aaPredicted RBP6.38□□□□□ -1.39
SCLT1-207ENST00000506233 CCPG1Q9ULG6 757 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 DGKBQ9Y6T7 804 aa6.38□□□□□ -1.39
SCLT1-207ENST00000506233 CITO14578 2027 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 LAMA1P25391 3075 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 TRBV23-1A0A0A0MS06 115 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 TRAF5O00463 557 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 TYRP1P17643 537 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 UBA1P22314 1058 aaKnown RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 YWHABP31946 246 aaKnown RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 NPTX2P47972 431 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 ALDH5A1P51649 535 aaPredicted RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 ZNF132P52740 706 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 VSNL1P62760 191 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 PRPF4BQ13523 1007 aaKnown RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 ABHD17CQ6PCB6 329 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 CYP4V2Q6ZWL3 525 aaPredicted RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 RIOX2Q8IUF8 465 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 C7orf31Q8N865 590 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 ATP8B4Q8TF62 1192 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 SLC20A1Q8WUM9 679 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 FUBP3Q96I24 572 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 SCLT1Q96NL6 688 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 CDC6Q99741 560 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 CARD6Q9BX69 1037 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 TMEM117Q9H0C3 514 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 NT5C3AQ9H0P0 336 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 IFT122Q9HBG6 1241 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 PDGFCQ9NRA1 345 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 CEP72Q9P209 647 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 ODF2LQ9ULJ1 636 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 L1RE1Q9UN81 338 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 PCDHA13Q9Y5I0 950 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 GJA3Q9Y6H8 435 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 UMODL1Q5DID0 1318 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 SSU72P8A0A1W2PR75 194 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 ANO9A1A5B4 782 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 MEIS3P2A8K0S8 358 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 H0YGN5 161 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 O00370 1275 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 NCANO14594 1321 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 CBFA2T2O43439 604 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 C4BPAP04003 597 aaKnown RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 EDN3P14138 238 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 PEX5P50542 639 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 KIF11P52732 1056 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 RELBQ01201 579 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 NAB2Q15742 525 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 TPD52L1Q16890 204 aaPredicted RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 MINDY4Q4G0A6 757 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 KRT79Q5XKE5 535 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 TMEM192Q8IY95 271 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 WDTC1Q8N5D0 677 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 NOC3LQ8WTT2 800 aaKnown RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 CDCA5Q96FF9 252 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 TTC1Q99614 292 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 MOV10L1Q9BXT6 1211 aaKnown RBP6.37□□□□□ -1.39
SCLT1-207ENST00000506233 PARD6BQ9BYG5 372 aa6.37□□□□□ -1.39
SCLT1-207ENST00000506233 HAUS4Q9H6D7 363 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms