RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 XYLT2Q9H1B5 865 aa19.18■□□□□ 0.66
SMN1-204ENST00000506163 CYP4F11Q9HBI6 524 aa19.18■□□□□ 0.66
SMN1-204ENST00000506163 HCFC1R1Q9NWW0 138 aa19.18■□□□□ 0.66
SMN1-204ENST00000506163 DSEQ9UL01 958 aa19.18■□□□□ 0.66
SMN1-204ENST00000506163 FRMD4BQ9Y2L6 1034 aa19.18■□□□□ 0.66
SMN1-204ENST00000506163 TRIOO75962 3097 aa19.18■□□□□ 0.66
SMN1-204ENST00000506163 MAPK13O15264 365 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 HNRNPA1P09651 372 aaKnown RBP eCLIP19.17■□□□□ 0.66
SMN1-204ENST00000506163 CPB1P15086 417 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 ELMSAN1Q6PJG2 1045 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 GRASPQ7Z6J2 395 aaPredicted RBP19.17■□□□□ 0.66
SMN1-204ENST00000506163 RNF135Q8IUD6 432 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 TTC9BQ8N6N2 239 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 OXCT2Q9BYC2 517 aaPredicted RBP19.17■□□□□ 0.66
SMN1-204ENST00000506163 ZCWPW1Q9H0M4 648 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 TMLHEQ9NVH6 421 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 NME7Q9Y5B8 376 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 DOCK8Q8NF50 2099 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 GABRDO14764 452 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 TRIM49P0CI25 452 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 TRIM49CP0CI26 452 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 RPL13P26373 211 aaKnown RBP19.17■□□□□ 0.66
SMN1-204ENST00000506163 VAMP7P51809 220 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 PPP3CAQ08209 521 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 DUSP4Q13115 394 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 CCDC142Q17RM4 750 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 CCDC149Q6ZUS6 474 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 SV2AQ7L0J3 742 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 METTL23Q86XA0 190 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 FAM186BQ8IYM0 893 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 TOP6BLQ8N6T0 577 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 KBTBD7Q8WVZ9 684 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 EPHX3Q9H6B9 360 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 PIDD1Q9HB75 910 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 KIAA1468Q9P260 1216 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 DNMT3BQ9UBC3 853 aaKnown RBP19.17■□□□□ 0.66
SMN1-204ENST00000506163 SLC27A5Q9Y2P5 690 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 INSL5Q9Y5Q6 135 aa19.17■□□□□ 0.66
SMN1-204ENST00000506163 CLUHO75153 1309 aa19.16■□□□□ 0.66
SMN1-204ENST00000506163 MTMR11A4FU01 709 aa19.16■□□□□ 0.66
SMN1-204ENST00000506163 NRG2O14511 850 aaPredicted RBP19.16■□□□□ 0.66
SMN1-204ENST00000506163 PRRG1O14668 218 aa19.16■□□□□ 0.66
SMN1-204ENST00000506163 HUS1O60921 280 aa19.16■□□□□ 0.66
SMN1-204ENST00000506163 ELF1P32519 619 aa19.16■□□□□ 0.66
SMN1-204ENST00000506163 MYO1EQ12965 1108 aa19.16■□□□□ 0.66
SMN1-204ENST00000506163 ZACNQ401N2 412 aa19.16■□□□□ 0.66
SMN1-204ENST00000506163 POTEHQ6S545 545 aa19.16■□□□□ 0.66
SMN1-204ENST00000506163 RTL10Q7L3V2 364 aa19.16■□□□□ 0.66
SMN1-204ENST00000506163 DUSP9Q99956 384 aaKnown RBP19.16■□□□□ 0.66
SMN1-204ENST00000506163 POLIQ9UNA4 740 aa19.16■□□□□ 0.66
SMN1-204ENST00000506163 IKBKBO14920 756 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 LRRN2O75325 713 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 SOAT2O75908 522 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 POU2F2P09086 479 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 ACAT1P24752 427 aaKnown RBP19.15■□□□□ 0.66
SMN1-204ENST00000506163 CCNE1P24864 410 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 LMO2P25791 158 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 PSMC2P35998 433 aaKnown RBP19.15■□□□□ 0.66
SMN1-204ENST00000506163 SLC39A12Q504Y0 691 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 ADGRF2Q8IZF7 708 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 DHTKD1Q96HY7 919 aaPredicted RBP19.15■□□□□ 0.66
SMN1-204ENST00000506163 MYADMQ96S97 322 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 PKMYT1Q99640 499 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 CEP72Q9P209 647 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 MUTYHQ9UIF7 546 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 USTQ9Y2C2 406 aa19.15■□□□□ 0.66
SMN1-204ENST00000506163 PI4K2BG5E9Z4 385 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 STAU1O95793 577 aaKnown RBP19.14■□□□□ 0.65
SMN1-204ENST00000506163 FKBP3Q00688 224 aaKnown RBP19.14■□□□□ 0.65
SMN1-204ENST00000506163 BIRC3Q13489 604 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 NCOA4Q13772 614 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 WDR72Q3MJ13 1102 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 KLHL10Q6JEL2 608 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 TTI2Q6NXR4 508 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 INTS8Q75QN2 995 aaKnown RBP19.14■□□□□ 0.65
SMN1-204ENST00000506163 THEM5Q8N1Q8 247 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 TMEM86AQ8N2M4 240 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 ITFG1Q8TB96 612 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 GPT2Q8TD30 523 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 MRPL45Q9BRJ2 306 aaKnown RBP19.14■□□□□ 0.65
SMN1-204ENST00000506163 GTPBP4Q9BZE4 634 aaKnown RBP19.14■□□□□ 0.65
SMN1-204ENST00000506163 CLSTN2Q9H4D0 955 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 DDX43Q9NXZ2 648 aaKnown RBP19.14■□□□□ 0.65
SMN1-204ENST00000506163 MAFFQ9ULX9 164 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 NR2E1Q9Y466 385 aa19.14■□□□□ 0.65
SMN1-204ENST00000506163 CETN3O15182 167 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 PHACTR2O75167 634 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 ATP2C2O75185 946 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 XYLBO75191 536 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 GCLMP48507 274 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 AP3M2P53677 418 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 TWF1Q12792 350 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 TRPC3Q13507 836 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 SLC5A9Q2M3M2 681 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 DPH6Q7L8W6 267 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 HS6ST3Q8IZP7 471 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 NELFBQ8WX92 580 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 MED15Q96RN5 788 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 ACBD6Q9BR61 282 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 MKNK1Q9BUB5 465 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms