RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ANAPC1Q9H1A4 1944 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 TULP1O00294 542 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 ODC1P11926 461 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 AOC1P19801 751 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 EPHA5P54756 1037 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 FAM26FQ5R3K3 315 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 STXBP5Q5T5C0 1151 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 ARMCX5Q6P1M9 558 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 USP37Q86T82 979 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 OSTM1Q86WC4 334 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 NELFCDQ8IXH7 590 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 GPD1LQ8N335 351 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 IQUBQ8NA54 791 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 SHKBP1Q8TBC3 707 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 ZNF507Q8TCN5 953 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 KCNG4Q8TDN1 519 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 LEO1Q8WVC0 666 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 SCFD1Q8WVM8 642 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 NXPE3Q969Y0 559 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 RSPRY1Q96DX4 576 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 MTMR12Q9C0I1 747 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 ZCWPW1Q9H0M4 648 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 MFSD1Q9H3U5 465 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 CUEDC2Q9H467 287 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 TBC1D17Q9HA65 648 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 SLC2A4RGQ9NR83 387 aa18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 ZFP37Q9Y6Q3 630 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 ZNF638Q14966 1978 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-215ENST00000506161 MED19A0JLT2 244 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 OR6C75A6NL08 312 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 CLIC2O15247 247 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 IL18RAPO95256 599 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 MYL4P12829 197 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 GLULP15104 373 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 ATF6P18850 670 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 CLCN5P51795 746 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 POU5F1Q01860 360 aaKnown RBP18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 ALCAMQ13740 583 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 MYBPC2Q14324 1141 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 TEAD2Q15562 447 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 FAM78AQ5JUQ0 283 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 UNC13DQ70J99 1090 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 GPIHBP1Q8IV16 184 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 LPIN3Q9BQK8 851 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 MKNK1Q9BUB5 465 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 FOXQ1Q9C009 403 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 ARHGEF3Q9NR81 526 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 HSPBP1Q9NZL4 362 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 L1RE1Q9UN81 338 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 AGAP1Q9UPQ3 857 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 FANCMQ8IYD8 2048 aa18.06■□□□□ 0.48
PDLIM7-215ENST00000506161 A0A1B0GVL5 298 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 KPNA7A9QM74 516 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 GPR15P49685 360 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 GRM2Q14416 872 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 SLC39A12Q504Y0 691 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 GAREM2Q75VX8 874 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 PLEKHO2Q8TD55 490 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 TMEM206Q9H813 350 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 SLC39A2Q9NP94 309 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 AGPAT3Q9NRZ7 376 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 DLGAP2Q9P1A6 1054 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 MTF2Q9Y483 593 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 NME7Q9Y5B8 376 aa18.05■□□□□ 0.48
PDLIM7-215ENST00000506161 EIF3DO15371 548 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 LDHAP00338 332 aaKnown RBP18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 PRR29P0C7W0 189 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 PFKFB1P16118 471 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 CD72P21854 359 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 VIPR2P41587 438 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 SNW1Q13573 536 aaKnown RBP18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 PDZD4Q76G19 769 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 DGLUCYQ7Z3D6 616 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 NT5DC4Q86YG4 428 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 PDCL2Q8N4E4 241 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 RDH13Q8NBN7 331 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 KIAA0895Q8NCT3 520 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 ZNF512Q96ME7 567 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 ASB16Q96NS5 453 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 HPSEQ9Y251 543 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 GVINP1Q7Z2Y8 2422 aa18.04■□□□□ 0.48
PDLIM7-215ENST00000506161 CACNA1IQ9P0X4 2223 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 A0A1W2PRU2 124 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 DCNP07585 359 aaKnown RBP18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 ACAT1P24752 427 aaKnown RBP18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 BFSP1Q12934 665 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 ATL3Q6DD88 541 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 VITQ6UXI7 678 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 MTSS1LQ765P7 747 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 CCDC105Q8IYK2 499 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 CSGALNACT2Q8N6G5 542 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 ZNF516Q92618 1163 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 RMDN1Q96DB5 314 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 PAGE5Q96GU1 130 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 PKMYT1Q99640 499 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 GOLPH3LQ9H4A5 285 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 GDPD2Q9HCC8 539 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 INTS13Q9NVM9 706 aa18.03■□□□□ 0.48
PDLIM7-215ENST00000506161 GDE1Q9NZC3 331 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms