RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 LRRC8AQ8IWT6 810 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 RNF168Q8IYW5 571 aaPredicted RBP7.7□□□□□ -1.18
NUP54-204ENST00000506098 FIBCD1Q8N539 461 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 COLGALT1Q8NBJ5 622 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 APPL2Q8NEU8 664 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 WHAMMQ8TF30 809 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 KBTBD7Q8WVZ9 684 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 ZNF592Q92610 1267 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 SPAG5Q96R06 1193 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 YME1L1Q96TA2 773 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 UBE2OQ9C0C9 1292 aaKnown RBP7.7□□□□□ -1.18
NUP54-204ENST00000506098 SMYD3Q9H7B4 428 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 YY1AP1Q9H869 796 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.7□□□□□ -1.18
NUP54-204ENST00000506098 CISHQ9NSE2 258 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 TMEM51Q9NW97 253 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 MARCH5Q9NX47 278 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 HCSTQ9UBK5 93 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 NXF1Q9UBU9 619 aaKnown RBP7.7□□□□□ -1.18
NUP54-204ENST00000506098 DSEQ9UL01 958 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 BARX2Q9UMQ3 279 aaPredicted RBP7.7□□□□□ -1.18
NUP54-204ENST00000506098 PCDHB8Q9UN66 801 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 L1RE1Q9UN81 338 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 SNX9Q9Y5X1 595 aa7.7□□□□□ -1.18
NUP54-204ENST00000506098 MRPL42Q9Y6G3 142 aaKnown RBP7.7□□□□□ -1.18
NUP54-204ENST00000506098 C5orf67F2Z3F1 127 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 F8W810 466 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 H0YGN5 161 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 SYN3O14994 580 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 TLL1O43897 1013 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 TADA2AO75478 443 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 SERPING1P05155 500 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 PAEPP09466 180 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 WEE2P0C1S8 567 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 CCDC172P0C7W6 258 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 ODC1P11926 461 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 FGFR3P22607 806 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 BRCC3P46736 316 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 LHX1P48742 406 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 BPIFB4P59827 614 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 ELAVL2Q12926 359 aaKnown RBP7.69□□□□□ -1.18
NUP54-204ENST00000506098 MRPL58Q14197 206 aaKnown RBP7.69□□□□□ -1.18
NUP54-204ENST00000506098 TSR1Q2NL82 804 aaKnown RBP7.69□□□□□ -1.18
NUP54-204ENST00000506098 E4F1Q66K89 784 aaPredicted RBP7.69□□□□□ -1.18
NUP54-204ENST00000506098 HGSNATQ68CP4 663 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 FUT10Q6P4F1 479 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 DSTYKQ6XUX3 929 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 TMEM139Q8IV31 216 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 CRYBG2Q8N1P7 616 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 SLC39A11Q8N1S5 342 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 PDCL2Q8N4E4 241 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 RABGGTAQ92696 567 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 IGSF21Q96ID5 467 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 RNPC3Q96LT9 517 aaKnown RBP7.69□□□□□ -1.18
NUP54-204ENST00000506098 ZNF558Q96NG5 402 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 MMS19Q96T76 1030 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 ZBED2Q9BTP6 218 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 GPR62Q9BZJ7 368 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 PRO3102Q9H379 93 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 AAASQ9NRG9 546 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 STK39Q9UEW8 545 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 SSUH2Q9Y2M2 353 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 RWDD3Q9Y3V2 267 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 NME7Q9Y5B8 376 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 PCDHB4Q9Y5E5 795 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 PCDHA11Q9Y5I1 949 aa7.69□□□□□ -1.18
NUP54-204ENST00000506098 BZW2Q9Y6E2 419 aaKnown RBP7.69□□□□□ -1.18
NUP54-204ENST00000506098 DOCK4Q8N1I0 1966 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 TRANK1O15050 2925 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 SSU72P8A0A1W2PR75 194 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 LINC01553A4QN01 128 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 NT5C1B-RDH14C9J2C7 533 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 CYP26A1O43174 497 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 GFPT2O94808 682 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 OAZ2O95190 189 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 PNMA6AP0CW24 399 aaPredicted RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 PPM1AP35813 382 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 GNL1P36915 607 aaPredicted RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 RAP1GAPP47736 663 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 NDST1P52848 882 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 RAD23BP54727 409 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 PLCB3Q01970 1234 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 PTK2Q05397 1052 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 GOLGA8FQ08AF8 430 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 GOLGA8DPQ0D2H9 430 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 ASIC2Q16515 512 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 ASTE1Q2TB18 679 aaPredicted RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 WSCD1Q658N2 575 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 TMEM270Q6UE05 265 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 SCARA5Q6ZMJ2 495 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 OSTM1Q86WC4 334 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 TMEM173Q86WV6 379 aaPredicted RBP7.68□□□□□ -1.18
NUP54-204ENST00000506098 ZNF677Q86XU0 584 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 TMTC1Q8IUR5 882 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 GPR65Q8IYL9 337 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 ADGRF2Q8IZF7 708 aa7.68□□□□□ -1.18
NUP54-204ENST00000506098 SLC4A11Q8NBS3 891 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms