RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ZHX3Q9H4I2 956 aa17.42■□□□□ 0.38
PDLIM7-213ENST00000505074 FASNP49327 2511 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-213ENST00000505074 K7ENM7 598 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 ABLIM1O14639 778 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 SYN3O14994 580 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 FAM13AO94988 1023 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 CXCL8P10145 99 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 HOXC13P31276 330 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 LIG4P49917 911 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 EPHA5P54756 1037 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 SPAG1Q07617 926 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 ZNF252P-AS1Q0IIN9 211 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 FCHO2Q0JRZ9 810 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 TWF1Q12792 350 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 PON2Q15165 354 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 CTXN3Q4LDR2 81 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 LRSAM1Q6UWE0 723 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 ZPBP2Q6X784 338 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 KIF12Q96FN5 646 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 AK8Q96MA6 479 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 NTPCRQ9BSD7 190 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 CEP72Q9P209 647 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 TUBGCP4Q9UGJ1 667 aa17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 NUP210Q8TEM1 1887 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-213ENST00000505074 VPS37CA5D8V6 355 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 SRRM3A6NNA2 597 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 HNRNPDLO14979 420 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 AKAP3O75969 853 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 CPB1P15086 417 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 MARCKSP29966 332 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 PXNP49023 591 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 PPP2R3AQ06190 1150 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 MCL1Q07820 350 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 CCINQ13939 588 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 SLC10A6Q3KNW5 377 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 ZNF280DQ6N043 979 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 HAUS6Q7Z4H7 955 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 MYCT1Q8N699 235 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 TTC8Q8TAM2 541 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 ZC3H10Q96K80 434 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 TBC1D32Q96NH3 1257 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 REEP2Q9BRK0 252 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 EDEM2Q9BV94 578 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 TMEM121BQ9BXQ6 578 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 FBXL5Q9UKA1 691 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 ODF2LQ9ULJ1 636 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 MAFFQ9ULX9 164 aa17.4■□□□□ 0.38
PDLIM7-213ENST00000505074 GIPC1O14908 333 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 EXTL3O43909 919 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 TBCAO75347 108 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 BMP15O95972 392 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 CLTAP09496 248 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 SPINK2P20155 84 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 NCKAP1LP55160 1127 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 ARHGAP29Q52LW3 1261 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 ARSHQ5FYA8 562 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 DAB2IPQ5VWQ8 1189 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 APPL2Q8NEU8 664 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 SHKBP1Q8TBC3 707 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 RSPRY1Q96DX4 576 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 FAM212AQ96EL1 285 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 SUSD3Q96L08 255 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 GTSE1Q9NYZ3 720 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 AFF4Q9UHB7 1163 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 LHX6Q9UPM6 363 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 SLC8A2Q9UPR5 921 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 ASPMQ8IZT6 3477 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 ZFYVE26Q68DK2 2539 aa17.39■□□□□ 0.37
PDLIM7-213ENST00000505074 ATG2BQ96BY7 2078 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 C4orf47A7E2U8 309 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 DPYSL4O14531 572 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 MEFVO15553 781 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 ATG13O75143 517 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 PLCG1P19174 1290 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 TNFSF9P41273 254 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 MRPL58Q14197 206 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 MCM6Q14566 821 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 KARSQ15046 597 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 TCEAL6Q6IPX3 200 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 BRAPQ7Z569 592 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 DDX12PQ92771 950 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 TCEAL3Q969E4 200 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 PARVGQ9HBI0 331 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 WASF3Q9UPY6 502 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 ZZEF1O43149 2961 aa17.38■□□□□ 0.37
PDLIM7-213ENST00000505074 ANKRD11Q6UB99 2663 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 NUP205Q92621 2012 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 SPEGQ15772 3267 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 A0A1W2PRU2 124 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 TULP1O00294 542 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 SLC26A4O43511 780 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 XPOTO43592 962 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 LONP1P36776 959 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 RING1Q06587 406 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 SF3A1Q15459 793 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 PLK5Q496M5 336 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 SH3PXD2AQ5TCZ1 1133 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 DSTYKQ6XUX3 929 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 USP37Q86T82 979 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 ARID3BQ8IVW6 561 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms