RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 GRHL1Q9NZI5 618 aa16.37■□□□□ 0.21
SNCAIP-207ENST00000504884 MTRF1LQ9UGC7 380 aaKnown RBP16.37■□□□□ 0.21
SNCAIP-207ENST00000504884 STRIP2Q9ULQ0 834 aa16.37■□□□□ 0.21
SNCAIP-207ENST00000504884 TCRBV5S1A1TA0A578 114 aa16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 HMGB1P1B2RPK0 211 aaPredicted RBP16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 TSPAN1O60635 241 aa16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 RPS6KA5O75582 802 aa16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 RPL21P46778 160 aaKnown RBP16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 KCNJ1P48048 391 aa16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 IRF5Q13568 498 aa16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 KCTD19Q17RG1 926 aaPredicted RBP16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 DCUN1D2Q6PH85 259 aa16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 ZDHHC24Q6UX98 284 aa16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 SYDE1Q6ZW31 735 aaPredicted RBP16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 ATP6V1G3Q96LB4 118 aa16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 TMBIM4Q9HC24 238 aa16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 USTQ9Y2C2 406 aa16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 ANK1P16157 1881 aa16.36■□□□□ 0.21
SNCAIP-207ENST00000504884 MEFVO15553 781 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 SHOX2O60902 331 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 MYZAPP0CAP1 466 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 CD19P15391 556 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 SSR1P43307 286 aaKnown RBP16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 RAD23BP54727 409 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 TAS2R40P59535 323 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 RPL7AP62424 266 aaKnown RBP16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 SKOR1P84550 965 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 PIGHQ14442 188 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 TMEM132DQ14C87 1099 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 PPP1R7Q15435 360 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 EMC10Q5UCC4 262 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 LRRC38Q5VT99 294 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 ILDR2Q71H61 639 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 CCDC50Q8IVM0 306 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 RCOR2Q8IZ40 523 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 CXorf38Q8TB03 319 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 FBXO25Q8TCJ0 367 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 GRK7Q8WTQ7 553 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 C1orf54Q8WWF1 131 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 FAM124BQ9H5Z6 455 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 ATP8A1Q9Y2Q0 1164 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 PTPN22Q9Y2R2 807 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 C2CD2Q9Y426 696 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 RALAP11233 206 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 CDH8P55286 799 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 EIF3BP55884 814 aaKnown RBP16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 KCTD16Q68DU8 428 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 APBB1IPQ7Z5R6 666 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 C3orf20Q8ND61 904 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 ATL2Q8NHH9 583 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 ART4Q93070 314 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 SETD4Q9NVD3 440 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 ITGA11Q9UKX5 1188 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 ZSWIM8A7E2V4 1837 aa16.35■□□□□ 0.21
SNCAIP-207ENST00000504884 A6NJR5 290 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 DYNC1LI2O43237 492 aaPredicted RBP16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 GJB6O95452 261 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 STAU1O95793 577 aaKnown RBP16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 GRM5P41594 1212 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 RAP1GAPP47736 663 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 PMS2P54278 862 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 RBP5P82980 135 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 ZNF844Q08AG5 666 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 KLF1Q13351 362 aaPredicted RBP16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 LLGL1Q15334 1064 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 CCNG2Q16589 344 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 ZSCAN26Q16670 478 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 PPP1R15BQ5SWA1 713 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 DENND1BQ6P3S1 775 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 TTC39CQ8N584 583 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 TMEM176AQ96HP8 235 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 HPDLQ96IR7 371 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 CAPS2Q9BXY5 557 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 OSBPL8Q9BZF1 889 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 DCLK3Q9C098 648 aa16.34■□□□□ 0.21
SNCAIP-207ENST00000504884 CILPO75339 1184 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 CALCOCO2Q13137 446 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 DCAF4L1Q3SXM0 396 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 DAB2IPQ5VWQ8 1189 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 NIPA2Q8N8Q9 360 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 RBM41Q96IZ5 413 aaKnown RBP16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 MCEEQ96PE7 176 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 GCOM2Q9BZD3 368 aaPredicted RBP16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 SDCBP2Q9H190 292 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 PABPC3Q9H361 631 aaKnown RBP16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 PLEKHA5Q9HAU0 1116 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 RRAGCQ9HB90 399 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 CHST7Q9NS84 486 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 DPP3Q9NY33 737 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 WHRNQ9P202 907 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 WDR35Q9P2L0 1181 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 AGAP1Q9UPQ3 857 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 NRCAMQ92823 1304 aa16.33■□□□□ 0.21
SNCAIP-207ENST00000504884 SIGLEC16A6NMB1 481 aa16.33■□□□□ 0.2
SNCAIP-207ENST00000504884 O00370 1275 aa16.33■□□□□ 0.2
SNCAIP-207ENST00000504884 GAS8O95995 478 aa16.33■□□□□ 0.2
SNCAIP-207ENST00000504884 ITIH2P19823 946 aa16.33■□□□□ 0.2
SNCAIP-207ENST00000504884 PTPN11Q06124 597 aaPredicted RBP16.33■□□□□ 0.2
SNCAIP-207ENST00000504884 MAP2K5Q13163 448 aa16.33■□□□□ 0.2
SNCAIP-207ENST00000504884 SNX1Q13596 522 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms