RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 CHURC1-FNTBB4DL54 471 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 K7ERI5 159 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 ERVH48-1M5A8F1 160 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 SEC24AO95486 1093 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 RETP07949 1114 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 CYP11B2P19099 503 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 TGM1P22735 817 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 CCR2P41597 374 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 FNTBP49356 437 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 ANAPC15P60006 121 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 SOX4Q06945 474 aaPredicted RBP9.9□□□□□ -0.82
DHFR-202ENST00000504396 NR1H3Q13133 447 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 SRSF5Q13243 272 aaKnown RBP9.9□□□□□ -0.82
DHFR-202ENST00000504396 FZD5Q13467 585 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 LRRC32Q14392 662 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 NT5DC1Q5TFE4 455 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 HAUS3Q68CZ6 603 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 ZNF280DQ6N043 979 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 PRR23CQ6ZRP0 262 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 TCEAL8Q8IYN2 117 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 DEPDC1BQ8WUY9 529 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 ZSWIM3Q96MP5 696 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 TCHPQ9BT92 498 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 TMEM60Q9H2L4 133 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 SEMA4GQ9NTN9 838 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 FBXL5Q9UKA1 691 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 MAFFQ9ULX9 164 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 COL4A2P08572 1712 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 NCOR2Q9Y618 2525 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 CITO14578 2027 aa9.9□□□□□ -0.82
DHFR-202ENST00000504396 SHISA7A6NL88 538 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 SLC30A4O14863 429 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 SYN3O14994 580 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 WFS1O76024 890 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 ABLIM3O94929 683 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 OR52Z1P0C646 297 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 FDPSP14324 419 aaKnown RBP9.9□□□□□ -0.83
DHFR-202ENST00000504396 RPA1P27694 616 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 MARCKSP29966 332 aaPredicted RBP9.9□□□□□ -0.83
DHFR-202ENST00000504396 CCT6AP40227 531 aaKnown RBP9.9□□□□□ -0.83
DHFR-202ENST00000504396 SAFBQ15424 915 aaKnown RBP eCLIP9.9□□□□□ -0.831e-6■■■■□ 20.9
DHFR-202ENST00000504396 TEAD2Q15562 447 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 AASDHQ4L235 1098 aaPredicted RBP9.9□□□□□ -0.83
DHFR-202ENST00000504396 LCE2AQ5TA79 106 aaPredicted RBP9.9□□□□□ -0.83
DHFR-202ENST00000504396 TPGS2Q68CL5 300 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 IL31Q6EBC2 164 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 CD300LGQ6UXG3 332 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 Q6ZVU0 165 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 TTC8Q8TAM2 541 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 KIFAP3Q92845 792 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 ACAP3Q96P50 834 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 PGLYRP2Q96PD5 576 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 CDT1Q9H211 546 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 BHMT2Q9H2M3 363 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 TRPV5Q9NQA5 729 aa9.9□□□□□ -0.83
DHFR-202ENST00000504396 RBM12Q9NTZ6 932 aaKnown RBP9.9□□□□□ -0.83
DHFR-202ENST00000504396 HEPACAM2A8MVW5 462 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 TERTO14746 1132 aaKnown RBP9.89□□□□□ -0.83
DHFR-202ENST00000504396 LRP3O75074 770 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 TDGF1P13385 188 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 MATR3P43243 847 aaKnown RBP eCLIP9.89□□□□□ -0.83
DHFR-202ENST00000504396 SOX9P48436 509 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 PEX3P56589 373 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 GUCY1B3Q02153 619 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 DMWDQ09019 674 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 DMP1Q13316 513 aaPredicted RBP9.89□□□□□ -0.83
DHFR-202ENST00000504396 GNL2Q13823 731 aaKnown RBP9.89□□□□□ -0.83
DHFR-202ENST00000504396 ZNF174Q15697 407 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 C1orf228Q6PIY5 440 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 MAP4K3Q8IVH8 894 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 C12orf50Q8NA57 414 aaPredicted RBP9.89□□□□□ -0.83
DHFR-202ENST00000504396 LEMD2Q8NC56 503 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 APPL2Q8NEU8 664 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 GTF3C6Q969F1 213 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 C18orf25Q96B23 403 aaPredicted RBP9.89□□□□□ -0.83
DHFR-202ENST00000504396 MRPL4Q9BYD3 311 aaKnown RBP9.89□□□□□ -0.83
DHFR-202ENST00000504396 CEP72Q9P209 647 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 ANKFY1Q9P2R3 1169 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 TNFSF13BQ9Y275 285 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 GPR179Q6PRD1 2367 aa9.89□□□□□ -0.83
DHFR-202ENST00000504396 CACNA1BQ00975 2339 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 RALGAPA1Q6GYQ0 2036 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 A0A1W2PRU2 124 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 JAK2O60674 1132 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 LARGE1O95461 756 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 CHRNB1P11230 501 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 MLLT6P55198 1093 aaPredicted RBP9.88□□□□□ -0.83
DHFR-202ENST00000504396 PLD1Q13393 1074 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 CSRP2Q16527 193 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 ME3Q16798 604 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 XKR4Q5GH76 650 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 Q6ZS52 159 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 HAUS6Q7Z4H7 955 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 LONP2Q86WA8 852 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 MFSD6LQ8IWD5 586 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 SPEM1Q8N4L4 309 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 E2F7Q96AV8 911 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 MSANTD3Q96H12 275 aa9.88□□□□□ -0.83
DHFR-202ENST00000504396 ZMAT2Q96NC0 199 aaKnown RBP9.88□□□□□ -0.83
DHFR-202ENST00000504396 TBC1D32Q96NH3 1257 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms