RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	MICALCL	Q6ZW33	695 aa		13.81	□□□□□ -0.2
MATR3-233	ENST00000504203	PPM1E	Q8WY54	764 aa		13.81	□□□□□ -0.2
MATR3-233	ENST00000504203	SCLT1	Q96NL6	688 aa		13.81	□□□□□ -0.2
MATR3-233	ENST00000504203	MCEE	Q96PE7	176 aa		13.81	□□□□□ -0.2
MATR3-233	ENST00000504203	SLITRK1	Q96PX8	696 aa		13.81	□□□□□ -0.2
MATR3-233	ENST00000504203	FAM118B	Q9BPY3	351 aa		13.81	□□□□□ -0.2
MATR3-233	ENST00000504203	MINDY3	Q9H8M7	445 aa		13.81	□□□□□ -0.2
MATR3-233	ENST00000504203		F8VP50	259 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	INO80B-WBP1	J3KQ70	363 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	TTC4	O95801	387 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	CP	P00450	1065 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	TXN	P10599	105 aa	Known RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	GJC1	P36383	396 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	ADCY8	P40145	1251 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	SSR1	P43307	286 aa	Known RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	SLCO1A2	P46721	670 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	MBTD1	Q05BQ5	628 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	EFCAB12	Q6NXP0	572 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	DNAJC24	Q6P3W2	148 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	NIPA2	Q8N8Q9	360 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	CCDC89	Q8N998	374 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	ZBTB10	Q96DT7	871 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	RBM41	Q96IZ5	413 aa	Known RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	ZNF668	Q96K58	619 aa	Predicted RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	NLRP4	Q96MN2	994 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	INO80B	Q9C086	356 aa	Predicted RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	CDT1	Q9H211	546 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	DDX20	Q9UHI6	824 aa	Known RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	ANAPC5	Q9UJX4	755 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	TNFSF13B	Q9Y275	285 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	IVNS1ABP	Q9Y6Y0	642 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	EVPL	Q92817	2033 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	LOC102724159	A0A0B4J2E5	919 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	ASAP2	O43150	1006 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	TNNC2	P02585	160 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	IQCF3	P0C7M6	154 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	CLCN3	P51790	818 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	TAP1	Q03518	808 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	SLC20A2	Q08357	652 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	PWP2	Q15269	919 aa	Known RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	MFSD7	Q6UXD7	560 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	SCARA5	Q6ZMJ2	495 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	ARMC9	Q7Z3E5	817 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	CDR2L	Q86X02	465 aa	Predicted RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	RELL1	Q8IUW5	271 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	ANKRD36BP1	Q96IX9	119 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	NFKBIZ	Q9BYH8	718 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	STMN4	Q9H169	189 aa	Predicted RBP	13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	MROH8	Q9H579	483 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	PDGFC	Q9NRA1	345 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	KLHL11	Q9NVR0	708 aa		13.8	□□□□□ -0.2
MATR3-233	ENST00000504203	PI4K2B	G5E9Z4	385 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	LIAS	O43766	372 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	C22orf31	O95567	290 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	ACSL3	O95573	720 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	KRT10	P13645	584 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	DRD4	P21917	467 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	PTPN7	P35236	360 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	VPS41	P49754	854 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	OSTN	P61366	133 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	PIGH	Q14442	188 aa	Predicted RBP	13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	ZNF365	Q70YC5	407 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	ERICH1	Q86X53	443 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	TMEM192	Q8IY95	271 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	BBOF1	Q8ND07	529 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	CDCA5	Q96FF9	252 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	SERPINB12	Q96P63	405 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	BCO2	Q9BYV7	579 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	RNPEP	Q9H4A4	650 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	SIX4	Q9UIU6	781 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	POLI	Q9UNA4	740 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	GPR25	O00155	361 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	TCEA3	O75764	348 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	IL18RAP	O95256	599 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	CXCL8	P10145	99 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	CETN2	P41208	172 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	COPS2	P61201	443 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	KYNU	Q16719	465 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	LONRF1	Q17RB8	773 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	TXNRD3NB	Q6F5E7	133 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	DCUN1D2	Q6PH85	259 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	EXOC3L1	Q86VI1	746 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	CHMP6	Q96FZ7	201 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	FAXDC2	Q96IV6	333 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	PWWP2A	Q96N64	755 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	SELENOS	Q9BQE4	189 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	LHX5	Q9H2C1	402 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	IFT122	Q9HBG6	1241 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	NINJ2	Q9NZG7	142 aa		13.79	□□□□□ -0.2
MATR3-233	ENST00000504203	TJP3	O95049	919 aa		13.78	□□□□□ -0.2
MATR3-233	ENST00000504203	KRT1	P04264	644 aa		13.78	□□□□□ -0.2
MATR3-233	ENST00000504203	OSBP	P22059	807 aa		13.78	□□□□□ -0.2
MATR3-233	ENST00000504203	LIG3	P49916	1009 aa		13.78	□□□□□ -0.2
MATR3-233	ENST00000504203	YWHAE	P62258	255 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-233	ENST00000504203	LMNB2	Q03252	620 aa		13.78	□□□□□ -0.2
MATR3-233	ENST00000504203	POU5F1B	Q06416	359 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms