RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 CFHR1Q03591 330 aa13.76□□□□□ -0.21
LSM6-204ENST00000504181 PLD1Q13393 1074 aa13.76□□□□□ -0.21
LSM6-204ENST00000504181 NAXDQ8IW45 347 aa13.76□□□□□ -0.21
LSM6-204ENST00000504181 LSM14AQ8ND56 463 aaKnown RBP13.76□□□□□ -0.21
LSM6-204ENST00000504181 SPACA7Q96KW9 195 aa13.76□□□□□ -0.21
LSM6-204ENST00000504181 CRISPLD1Q9H336 500 aa13.76□□□□□ -0.21
LSM6-204ENST00000504181 PRORYQ9H606 182 aa13.76□□□□□ -0.21
LSM6-204ENST00000504181 PRMT7Q9NVM4 692 aaPredicted RBP13.76□□□□□ -0.21
LSM6-204ENST00000504181 RGL1Q9NZL6 768 aa13.76□□□□□ -0.21
LSM6-204ENST00000504181 VAV3Q9UKW4 847 aa13.76□□□□□ -0.21
LSM6-204ENST00000504181 MAFFQ9ULX9 164 aa13.76□□□□□ -0.21
LSM6-204ENST00000504181 STK24Q9Y6E0 443 aa13.76□□□□□ -0.21
LSM6-204ENST00000504181 TRABD2BA6NFA1 517 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 PODXLO00592 558 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 SERPINF2P08697 491 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 OR4Q2P0C623 313 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 CHMLP26374 656 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 GJA4P35212 333 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 DPP6P42658 865 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 SEC13P55735 322 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 PPP2R5CQ13362 524 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 CTTNQ14247 550 aaKnown RBP13.75□□□□□ -0.21
LSM6-204ENST00000504181 PEAR1Q5VY43 1037 aaPredicted RBP13.75□□□□□ -0.21
LSM6-204ENST00000504181 SPRYD3Q8NCJ5 442 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 OLIG1Q8TAK6 271 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 CD101Q93033 1021 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 DYDC2Q96IM9 177 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 PRIMPOLQ96LW4 560 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 TCEANC2Q96MN5 208 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 ADPGKQ9BRR6 497 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 POLR3FQ9H1D9 316 aaPredicted RBP13.75□□□□□ -0.21
LSM6-204ENST00000504181 TASP1Q9H6P5 420 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 CAPN10Q9HC96 672 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 DNAAF2Q9NVR5 837 aaKnown RBP13.75□□□□□ -0.21
LSM6-204ENST00000504181 NAP1L2Q9ULW6 460 aaPredicted RBP13.75□□□□□ -0.21
LSM6-204ENST00000504181 TBX20Q9UMR3 447 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 NUB1Q9Y5A7 615 aa13.75□□□□□ -0.21
LSM6-204ENST00000504181 CYP3A7-CYP3A51PA0A087WV96 503 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 ANTXRLA6NF34 631 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 ARHGAP33O14559 1287 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 SGSM2O43147 1006 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 GSPT1P15170 499 aaKnown RBP13.74□□□□□ -0.21
LSM6-204ENST00000504181 CYP3A7P24462 503 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 WEE1P30291 646 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 ADD1P35611 737 aaKnown RBP13.74□□□□□ -0.21
LSM6-204ENST00000504181 ALDH1A3P47895 512 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 CYP4A11Q02928 519 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 DUSP4Q13115 394 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 C2orf27AQ580R0 203 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 EEF1DP3Q658K8 133 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 TMPRSS7Q7RTY8 843 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 DNAJB7Q7Z6W7 309 aaPredicted RBP13.74□□□□□ -0.21
LSM6-204ENST00000504181 SMC5Q8IY18 1101 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 DEFB119Q8N690 84 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 CEP76Q8TAP6 659 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 PSMG2Q969U7 264 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 EXOC4Q96A65 974 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 FCRL3Q96P31 734 aaPredicted RBP13.74□□□□□ -0.21
LSM6-204ENST00000504181 CCL26Q9Y258 94 aa13.74□□□□□ -0.21
LSM6-204ENST00000504181 KLF18A0A0U1RQI7 1052 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 SLC27A2O14975 620 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 SLC37A4O43826 429 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 SOAT2O75908 522 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 FGF19O95750 216 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 EDN1P05305 212 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 LIG1P18858 919 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 NUCB1Q02818 461 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 KCNC4Q03721 635 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 PRPF4BQ13523 1007 aaKnown RBP13.73□□□□□ -0.21
LSM6-204ENST00000504181 LMBRD2Q68DH5 695 aaPredicted RBP13.73□□□□□ -0.21
LSM6-204ENST00000504181 CCDC33Q8N5R6 958 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 CCDC148Q8NFR7 591 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 DDX12PQ92771 950 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 FZD8Q9H461 694 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 VPS54Q9P1Q0 977 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 DDX25Q9UHL0 483 aaKnown RBP13.73□□□□□ -0.21
LSM6-204ENST00000504181 SLC27A5Q9Y2P5 690 aa13.73□□□□□ -0.21
LSM6-204ENST00000504181 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.72□□□□□ -0.21
LSM6-204ENST00000504181 SMIM28A0A1B0GU29 152 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 HAX1O00165 279 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 MARCH6O60337 910 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 GJB3O75712 270 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 DGAT1O75907 488 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 ALDH1A2O94788 518 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 HNRNPLP14866 589 aaKnown RBP eCLIP13.72□□□□□ -0.21
LSM6-204ENST00000504181 MCM4P33991 863 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 HOXD12P35452 270 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 SRSF1Q07955 248 aaKnown RBP eCLIP13.72□□□□□ -0.21
LSM6-204ENST00000504181 SLC14A1Q13336 389 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 NBR1Q14596 966 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 FAM187BQ17R55 369 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 NCAPH2Q6IBW4 605 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 TMEM92Q6UXU6 159 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 ZBTB8OSQ8IWT0 167 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 CMTM8Q8IZV2 173 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 TTC9BQ8N6N2 239 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 BEST2Q8NFU1 509 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 RIN3Q8TB24 985 aa13.72□□□□□ -0.21
LSM6-204ENST00000504181 USP33Q8TEY7 942 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms