RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 KRT15P19012 456 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 AP3M2P53677 418 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 DNAJC3Q13217 504 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 PIGHQ14442 188 aaPredicted RBP15.81■□□□□ 0.12
SNF8-203ENST00000504000 NAA25Q14CX7 972 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 TBC1D10BQ4KMP7 808 aaPredicted RBP15.81■□□□□ 0.12
SNF8-203ENST00000504000 ANKRD20A2Q5SQ80 823 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 WASHC2DQ5SRD0 308 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 ANKRD20A1Q5TYW2 823 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 ANKRD20A3Q5VUR7 823 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 LLGL2Q6P1M3 1020 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
SNF8-203ENST00000504000 TMEM270Q6UE05 265 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 SEPT14Q6ZU15 432 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 FAM47EQ6ZV65 393 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 BZW1Q7L1Q6 419 aaKnown RBP15.81■□□□□ 0.12
SNF8-203ENST00000504000 CPXCR1Q8N123 301 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 RBBP8NLQ8NC74 664 aaPredicted RBP15.81■□□□□ 0.12
SNF8-203ENST00000504000 C10orf82Q8WW14 230 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 ALKBH8Q96BT7 664 aaKnown RBP15.81■□□□□ 0.12
SNF8-203ENST00000504000 ERP27Q96DN0 273 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 CDHR1Q96JP9 859 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 ZNF570Q96NI8 536 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 FHDC1Q9C0D6 1143 aaPredicted RBP15.81■□□□□ 0.12
SNF8-203ENST00000504000 TMEM39BQ9GZU3 492 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 TLE6Q9H808 572 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 APOBEC3GQ9HC16 384 aaKnown RBP15.81■□□□□ 0.12
SNF8-203ENST00000504000 LNPEPQ9UIQ6 1025 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 TRIM33Q9UPN9 1127 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 LRRC42Q9Y546 428 aa15.81■□□□□ 0.12
SNF8-203ENST00000504000 TESPA1A2RU30 521 aaPredicted RBP15.8■□□□□ 0.12
SNF8-203ENST00000504000 A8MUI8 341 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 GNAZP19086 355 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 RNASELQ05823 741 aaKnown RBP15.8■□□□□ 0.12
SNF8-203ENST00000504000 GPS1Q13098 491 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 PKN2Q16513 984 aaKnown RBP15.8■□□□□ 0.12
SNF8-203ENST00000504000 TFDP3Q5H9I0 405 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 MFSD7Q6UXD7 560 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 SPOCD1Q6ZMY3 1216 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 POLNQ7Z5Q5 900 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 UBR7Q8N806 425 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 ENDOVQ8N8Q3 282 aaKnown RBP15.8■□□□□ 0.12
SNF8-203ENST00000504000 DHRS4Q9BTZ2 278 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 RNPEPL1Q9HAU8 725 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.8■□□□□ 0.12
SNF8-203ENST00000504000 FARP1Q9Y4F1 1045 aaPredicted RBP15.8■□□□□ 0.12
SNF8-203ENST00000504000 hCG_1818297A0A087WSY0 165 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 CFHP08603 1231 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 KCNA2P16389 499 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 IBSPP21815 317 aaPredicted RBP15.8■□□□□ 0.12
SNF8-203ENST00000504000 CALB2P22676 271 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 CA4P22748 312 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 PHBP35232 272 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 RPA3P35244 121 aaPredicted RBP15.8■□□□□ 0.12
SNF8-203ENST00000504000 GEMIN4P57678 1058 aaKnown RBP15.8■□□□□ 0.12
SNF8-203ENST00000504000 C2CD6Q53TS8 623 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 XKR3Q5GH77 459 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 DAB2IPQ5VWQ8 1189 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 PHLDB2Q86SQ0 1253 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 TEX9Q8N6V9 391 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 SLC35B2Q8TB61 432 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 ZNF606Q8WXB4 792 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 ELMO3Q96BJ8 720 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 CGRRF1Q99675 332 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 TUBB6Q9BUF5 446 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 USTQ9Y2C2 406 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 WDR81Q562E7 1941 aa15.8■□□□□ 0.12
SNF8-203ENST00000504000 TM9SF1O15321 606 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 SPAG7O75391 227 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 STAM2O75886 525 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 KRT1P04264 644 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 T-ENOLP0DO92 83 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 RXRBP28702 533 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 NLRP11P59045 1033 aaKnown RBP15.79■□□□□ 0.12
SNF8-203ENST00000504000 GRM1Q13255 1194 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 WDR72Q3MJ13 1102 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 PPP1R15BQ5SWA1 713 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 GLIS1Q8NBF1 620 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 TTC13Q8NBP0 860 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 SLC7A6OSQ96CW6 309 aaPredicted RBP15.79■□□□□ 0.12
SNF8-203ENST00000504000 ZBED3Q96IU2 234 aaPredicted RBP15.79■□□□□ 0.12
SNF8-203ENST00000504000 PAIP2Q9BPZ3 127 aaKnown RBP15.79■□□□□ 0.12
SNF8-203ENST00000504000 TRIM6Q9C030 488 aaPredicted RBP15.79■□□□□ 0.12
SNF8-203ENST00000504000 POLR3FQ9H1D9 316 aaPredicted RBP15.79■□□□□ 0.12
SNF8-203ENST00000504000 VPS11Q9H270 941 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 CYP39A1Q9NYL5 469 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 GRID1Q9ULK0 1009 aa15.79■□□□□ 0.12
SNF8-203ENST00000504000 ZMYND8Q9ULU4 1186 aaPredicted RBP15.79■□□□□ 0.12
SNF8-203ENST00000504000 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.79■□□□□ 0.12
SNF8-203ENST00000504000 E7ESA3 106 aa15.78■□□□□ 0.12
SNF8-203ENST00000504000 POC1B-GALNT4F8VUJ3 575 aa15.78■□□□□ 0.12
SNF8-203ENST00000504000 LMNAP02545 664 aaKnown RBP15.78■□□□□ 0.12
SNF8-203ENST00000504000 NR3C2P08235 984 aa15.78■□□□□ 0.12
SNF8-203ENST00000504000 KRT10P13645 584 aa15.78■□□□□ 0.12
SNF8-203ENST00000504000 CDH5P33151 784 aaPredicted RBP15.78■□□□□ 0.12
SNF8-203ENST00000504000 CDKN2BP42772 138 aa15.78■□□□□ 0.12
SNF8-203ENST00000504000 RPL7AP62424 266 aaKnown RBP15.78■□□□□ 0.12
SNF8-203ENST00000504000 NOP14P78316 857 aaKnown RBP15.78■□□□□ 0.12
SNF8-203ENST00000504000 CBLBQ13191 982 aa15.78■□□□□ 0.12
SNF8-203ENST00000504000 KLHL38Q2WGJ6 581 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms