RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 TIE1P35590 1138 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 PLA2G5P39877 138 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 AARSP49588 968 aaKnown RBP eCLIP14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 NDUFV1P49821 464 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 MARSP56192 900 aaKnown RBP14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 LRMPQ12912 555 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 MAN2A1Q16706 1144 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 TCP11X2Q5H9J9 407 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 KIAA0319Q5VV43 1072 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 SPOPLQ6IQ16 392 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 PALB2Q86YC2 1186 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 IRF2BP1Q8IU81 584 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 RNF168Q8IYW5 571 aaPredicted RBP14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 ADGRF2Q8IZF7 708 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 CXorf38Q8TB03 319 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 PIK3R5Q8WYR1 880 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 TAF4BQ92750 862 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 BPIFA3Q9BQP9 254 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 CHST7Q9NS84 486 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 RAB20Q9NX57 234 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 CDY1Q9Y6F8 540 aa14.36□□□□□ -0.11
PGGT1B-204ENST00000503638 TEX28O15482 410 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 CAVIN2O95810 425 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 TYMPP19971 482 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 OR1D2P34982 312 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 RAP1GAPP47736 663 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 NOP14P78316 857 aaKnown RBP14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 C15orf39Q6ZRI6 1047 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 LUZP1Q86V48 1076 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 PDCL2Q8N4E4 241 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 TOP6BLQ8N6T0 577 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 OR6B3Q8NGW1 331 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 LNX1Q8TBB1 728 aaPredicted RBP14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 KHSRPQ92945 711 aaKnown RBP eCLIP14.35□□□□□ -0.111e-5■□□□□ 10.3
PGGT1B-204ENST00000503638 KLHL5Q96PQ7 755 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 VPS16Q9H269 839 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 SMYD3Q9H7B4 428 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 CBX8Q9HC52 389 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 GDAP2Q9NXN4 497 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 CLDND1Q9NY35 253 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 GCNT4Q9P109 453 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 L1RE1Q9UN81 338 aa14.35□□□□□ -0.11
PGGT1B-204ENST00000503638 CLASP2O75122 1294 aaKnown RBP14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 EFEMP2O95967 443 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 GLUD1P00367 558 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 ASS1P00966 412 aaKnown RBP14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 SPATA31D3P0C874 917 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 CD58P19256 250 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 GTF2F1P35269 517 aaKnown RBP eCLIP14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 CDR1P51861 262 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 TSPY1Q01534 308 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 HYAL1Q12794 435 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 DUSP6Q16828 381 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 SOWAHAQ2M3V2 549 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 VWA3BQ502W6 1294 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 FKBP15Q5T1M5 1219 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 CDKAL1Q5VV42 579 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 ELMSAN1Q6PJG2 1045 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 SPATA31D4Q6ZUB0 917 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 PPFIBP1Q86W92 1011 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 DHX40Q8IX18 779 aaKnown RBP14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 TMEM86AQ8N2M4 240 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 SEMA4DQ92854 862 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 PCMTD1Q96MG8 357 aaPredicted RBP14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 CRACR2AQ9BSW2 395 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 LRFN3Q9BTN0 628 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 NIF3L1Q9GZT8 377 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 XYLT2Q9H1B5 865 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 DDX43Q9NXZ2 648 aaKnown RBP14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 MTRRQ9UBK8 725 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 FBXL5Q9UKA1 691 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 SCN1AP35498 2009 aa14.34□□□□□ -0.11
PGGT1B-204ENST00000503638 OR6C75A6NL08 312 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 STAU1O95793 577 aaKnown RBP14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 PDGFRBP09619 1106 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 WEE2P0C1S8 567 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 OR4Q2P0C623 313 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 TRIM21P19474 475 aaKnown RBP14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 ACAT1P24752 427 aaKnown RBP14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 LHX1P48742 406 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 KRT31Q15323 416 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 GBP6Q6ZN66 633 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 RNF214Q8ND24 703 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 FAM200AQ8TCP9 573 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 FAM122AQ96E09 287 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 NT5C1BQ96P26 610 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 PGLYRP2Q96PD5 576 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 CDCA3Q99618 268 aaPredicted RBP14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 MRPL45Q9BRJ2 306 aaKnown RBP14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 C1QTNF1Q9BXJ1 281 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 INTS2Q9H0H0 1204 aaKnown RBP14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 NDST4Q9H3R1 872 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 CD320Q9NPF0 282 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 FNIP2Q9P278 1114 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 BACE2Q9Y5Z0 518 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 IRAK3Q9Y616 596 aa14.33□□□□□ -0.12
PGGT1B-204ENST00000503638 BRWD1Q9NSI6 2320 aa14.32□□□□□ -0.12
PGGT1B-204ENST00000503638 MYO7AQ13402 2215 aa14.32□□□□□ -0.12
PGGT1B-204ENST00000503638 FSD2A1L4K1 749 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms