RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 FUT8Q9BYC5 575 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 DCDC2Q9UHG0 476 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TBX20Q9UMR3 447 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 SNX24Q9Y343 169 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 STARD13Q9Y3M8 1113 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 CLUHO75153 1309 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 C16orf96A6NNT2 1141 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 GLRA3O75311 464 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 FKBP6O75344 327 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 PROSCO94903 275 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 SEC31AO94979 1220 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 WEE2P0C1S8 567 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 CETPP11597 493 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 HADHBP55084 474 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 RIPPLY1Q0D2K3 151 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 SFSWAPQ12872 951 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 KPNB1Q14974 876 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TMEM132DQ14C87 1099 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 MTFR1Q15390 333 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 E2F4Q16254 413 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 PKN1Q16512 942 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 SYCP2LQ5T4T6 812 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 UGT3A1Q6NUS8 523 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 ZNF720Q7Z2F6 126 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 GLYCTKQ8IVS8 523 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 PARP9Q8IXQ6 854 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 NOA1Q8NC60 698 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 RBBP8NLQ8NC74 664 aaPredicted RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 PPHLN1Q8NEY8 458 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 PBXIP1Q96AQ6 731 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 MAGEB18Q96M61 343 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TGS1Q96RS0 853 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TRIM4Q9C037 500 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TDRD3Q9H7E2 651 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 SAR1AQ9NR31 198 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 KLHL8Q9P2G9 620 aaPredicted RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 ITGA11Q9UKX5 1188 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 ALG6Q9Y672 507 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 C3orf70A6NLC5 250 aaPredicted RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 SH3BP5O60239 455 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 SORBS3O60504 671 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 PYGLP06737 847 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 HSPA1AP0DMV8 641 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 HSPA1BP0DMV9 641 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TOB1P50616 345 aaPredicted RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 ZNF200P98182 395 aaPredicted RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 GIT2Q14161 759 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 INPP5AQ14642 412 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 AARS2Q5JTZ9 985 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 RASIP1Q5U651 963 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 CYP4F22Q6NT55 531 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 NFRKBQ6P4R8 1299 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 SEPT14Q6ZU15 432 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 NUDCD3Q8IVD9 361 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 LINC00116Q8NCU8 138 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 ZNF473Q8WTR7 871 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 DDI1Q8WTU0 396 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 HDAC11Q96DB2 347 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 WRNIP1Q96S55 665 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 CCT8L2Q96SF2 557 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 PRKD2Q9BZL6 878 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TRABDQ9H4I3 376 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 PCIF1Q9H4Z3 704 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 RPAP3Q9H6T3 665 aaPredicted RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 CYLDQ9NQC7 956 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 STK39Q9UEW8 545 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TUBGCP4Q9UGJ1 667 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 AAR2Q9Y312 384 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 DERAQ9Y315 318 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 ZSWIM8A7E2V4 1837 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 COL1A2P08123 1366 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 CCT8L1PA6NM43 557 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 GOLGA8SH3BPF8 625 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 RBAK-RBAKDNI3L0D1 243 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 HGSO14964 777 aaPredicted RBP4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 POLBP06746 335 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 VIL1P09327 827 aaKnown RBP4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 SUPT20HL2P0C7V6 817 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 GPD1P21695 349 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 EIF4BP23588 611 aaKnown RBP4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 LSP1P33241 339 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 SKIV2L2P42285 1042 aaKnown RBP4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 POLD2P49005 469 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 CPT1AP50416 773 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 IRAK1P51617 712 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 GEMIN4P57678 1058 aaKnown RBP4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 EIF3EP60228 445 aaKnown RBP4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 ACTR2P61160 394 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 PURAQ00577 322 aaKnown RBP4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 MED21Q13503 144 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 CUL2Q13617 745 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 VEPH1Q14D04 833 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 PSMD6Q15008 389 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 PTGISQ16647 500 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 SWSAP1Q6NVH7 229 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 NOTUMQ6P988 496 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 TRMT1LQ7Z2T5 733 aaKnown RBP4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 POLNQ7Z5Q5 900 aa4.97□□□□□ -1.61
NDFIP1-202ENST00000503388 CCNYQ8ND76 341 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms