RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 JAKMIP3Q5VZ66 844 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 CHST15Q7LFX5 561 aaPredicted RBP3.59□□□□□ -1.83
SCLT1-203ENST00000502495 TTC7BQ86TV6 843 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 CMTM4Q8IZR5 234 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 CLASRPQ8N2M8 674 aaKnown RBP3.59□□□□□ -1.83
SCLT1-203ENST00000502495 NKAPQ8N5F7 415 aaKnown RBP3.59□□□□□ -1.83
SCLT1-203ENST00000502495 LILRA3Q8N6C8 439 aaPredicted RBP3.59□□□□□ -1.83
SCLT1-203ENST00000502495 ZBTB34Q8NCN2 500 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 REPS2Q8NFH8 660 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 MDM1Q8TC05 714 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 POF1BQ8WVV4 589 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 RABGGTAQ92696 567 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 LRRC37BQ96QE4 947 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 GPHA2Q96T91 129 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 PDCD2LQ9BRP1 358 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 NAA15Q9BXJ9 866 aaKnown RBP3.59□□□□□ -1.83
SCLT1-203ENST00000502495 VPS11Q9H270 941 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 LANCL2Q9NS86 450 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 FBXO2Q9UK22 296 aaPredicted RBP3.59□□□□□ -1.83
SCLT1-203ENST00000502495 TSC22D4Q9Y3Q8 395 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 PCDHB1Q9Y5F3 818 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 NPC1L1Q9UHC9 1359 aa3.59□□□□□ -1.83
SCLT1-203ENST00000502495 PTPRUQ92729 1446 aa3.59□□□□□ -1.84
SCLT1-203ENST00000502495 CHD2O14647 1828 aaKnown RBP3.59□□□□□ -1.84
SCLT1-203ENST00000502495 NKTRP30414 1462 aaKnown RBP3.59□□□□□ -1.84
SCLT1-203ENST00000502495 QRICH2Q9H0J4 1663 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 A0A1W2PRX2 142 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 CDC14BO60729 498 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 FTLP02792 175 aaPredicted RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 ALDH2P05091 517 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 DDIT3P35638 169 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 CCT5P48643 541 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 HSPA2P54652 639 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 NPEPPSP55786 919 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 PPP2CBP62714 309 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 PPP2CAP67775 309 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 ADAM8P78325 824 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 CDC42EP1Q00587 391 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 DSC2Q02487 901 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 RIN1Q13671 783 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 MYBPC2Q14324 1141 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 ELF2Q15723 593 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 PRAMEF14Q5SWL7 426 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 LVRNQ6Q4G3 990 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 PDZD4Q76G19 769 aaPredicted RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 DENND1CQ8IV53 801 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 FAM43AQ8N2R8 423 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 ACRBPQ8NEB7 543 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 SHCBP1Q8NEM2 672 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 PPP1R35Q8TAP8 253 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 STON2Q8WXE9 905 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 CFHR4Q92496 578 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 CYFIP2Q96F07 1278 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 NEIL1Q96FI4 390 aaPredicted RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 TMX3Q96JJ7 454 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 CLPTM1LQ96KA5 538 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 LMF1Q96S06 567 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 CDK5RAP1Q96SZ6 601 aaKnown RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 DPYSL5Q9BPU6 564 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 CDK19Q9BWU1 502 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 EPC1Q9H2F5 836 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 PANK3Q9H999 370 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 IL23AQ9NPF7 189 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 KMT5AQ9NQR1 393 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 TMEM140Q9NV12 185 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 SAGE1Q9NXZ1 904 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 PGAP2Q9UHJ9 254 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 RABGAP1Q9Y3P9 1069 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 KNSTRNQ9Y448 316 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 MYBBP1AQ9BQG0 1328 aaKnown RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 ADGRB2O60241 1585 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 XRN1Q8IZH2 1706 aaKnown RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 UBE2QL1A1L167 161 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 MATN2O00339 956 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 TPP1O14773 563 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 SGTAO43765 313 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 SLC5A1P13866 664 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 ZKSCAN1P17029 563 aaPredicted RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 CR2P20023 1033 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 APBA1Q02410 837 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 TARDBPQ13148 414 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 TRIM14Q14142 442 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 LLGL1Q15334 1064 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 SURF1Q15526 300 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 THEMIS2Q5TEJ8 643 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 FAM43BQ6ZT52 329 aaPredicted RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 ADGRE4PQ86SQ3 457 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 MYLK4Q86YV6 388 aaPredicted RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 TRMT2AQ8IZ69 625 aaKnown RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 RGMAQ96B86 450 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 ARL8AQ96BM9 186 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 NAP1L5Q96NT1 182 aaPredicted RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 FAM193BQ96PV7 902 aaPredicted RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 CGRRF1Q99675 332 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 PTPN18Q99952 460 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 ZNF747Q9BV97 191 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 PRKRIP1Q9H875 184 aaPredicted RBP3.58□□□□□ -1.84
SCLT1-203ENST00000502495 FNIP2Q9P278 1114 aa3.58□□□□□ -1.84
SCLT1-203ENST00000502495 AJAP1Q9UKB5 411 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms