RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 OR52Z1P0C646 297 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 STIP1P31948 543 aaKnown RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 HOXD13P35453 343 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 MAGEA1P43355 309 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ARHGAP4P98171 946 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZNF543Q08ER8 600 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 DLG1Q12959 904 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 PAK1Q13153 545 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 AUHQ13825 339 aaKnown RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 RAPGEF1Q13905 1077 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 LLGL1Q15334 1064 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 CYTH1Q15438 398 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 TAF1CQ15572 869 aaPredicted RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 TGFBIQ15582 683 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 BCL2A1Q16548 175 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZCWPW2Q504Y3 356 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ASPRV1Q53RT3 343 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 PRR16Q569H4 304 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 CIAPIN1Q6FI81 312 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 RSBN1LQ6PCB5 846 aaPredicted RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 HS2ST1Q7LGA3 356 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCDC65Q8IXS2 484 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 SNX29Q8TEQ0 813 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 TRIM47Q96LD4 638 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCDC17Q96LX7 622 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZDHHC15Q96MV8 337 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 CEP44Q9C0F1 390 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 GBA3Q9H227 469 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 JMJD4Q9H9V9 463 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 FAM32AQ9Y421 112 aaKnown RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 WNK3Q9BYP7 1800 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 MKI67P46013 3256 aaKnown RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 C19orf81C9J6K1 198 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 NFKBIEO00221 500 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 SORBS3O60504 671 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 NDUFB10O96000 172 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 SMIM18P0DKX4 95 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 COL6A1P12109 1028 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 XRCC5P13010 732 aaKnown RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 TCEA1P23193 301 aaKnown RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 MAN1A1P33908 653 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 MTIF2P46199 727 aaKnown RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 CPA2P48052 419 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 TRPC1P48995 793 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 RCAN1P53805 252 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 CXCL9Q07325 125 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 STK4Q13043 487 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCDC6Q16204 474 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZFP28Q8NHY6 868 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 FBXO25Q8TCJ0 367 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 NACC2Q96BF6 587 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 WNT8AQ9H1J5 351 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 FBXO28Q9NVF7 368 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZNF70Q9UC06 446 aaPredicted RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 PPP2R3BQ9Y5P8 575 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 MYPNQ86TC9 1320 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 LRP5O75197 1615 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 KLRG2A4D1S0 409 aaPredicted RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 OPHN1O60890 802 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 FUCA1P04066 466 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 BMP3P12645 472 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 IL4RP24394 825 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 HIRAP54198 1017 aaPredicted RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 ATP2C1P98194 919 aaPredicted RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 SP4Q02446 784 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 MSLNQ13421 630 aaPredicted RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 DGKZQ13574 1117 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 C21orf62-AS1Q17RA5 79 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 TAF1BQ53T94 588 aaPredicted RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 SFT2D3Q587I9 215 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 DCAF6Q58WW2 860 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 MEI1Q5TIA1 1274 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 KRT79Q5XKE5 535 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 LPCAT4Q643R3 524 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 MAP1SQ66K74 1059 aaPredicted RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 HGSNATQ68CP4 663 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZDHHC24Q6UX98 284 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 SH3BP5LQ7L8J4 393 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 FBXO11Q86XK2 927 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 DTX3Q8N9I9 347 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 SCFD2Q8WU76 684 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZNF184Q99676 751 aaPredicted RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 NEURL2Q9BR09 285 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 NDEL1Q9GZM8 345 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 TGIF2Q9GZN2 237 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 FAM192AQ9GZU8 254 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 C12orf65Q9H3J6 166 aaKnown RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 BMP2KQ9NSY1 1161 aaPredicted RBP6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 CNTN3Q9P232 1028 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 TBK1Q9UHD2 729 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 MOSPD1Q9UJG1 213 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 ARL2BPQ9Y2Y0 163 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 SNX24Q9Y343 169 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 TRIM17Q9Y577 477 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 PCDHGA3Q9Y5H0 932 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 MROH7Q68CQ1 1323 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 MEIS1O00470 390 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 EXOC3O60645 756 aa6.09□□□□□ -1.43
SOX2-OT-218ENST00000498731 SUN1O94901 812 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms