RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 EXTL3O43909 919 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 WFS1O76024 890 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 HLA-DRAP01903 254 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 PIK3CAP42336 1068 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 ABL2P42684 1182 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 CCNG1P51959 295 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 POLGP54098 1239 aaPredicted RBP17.33■□□□□ 0.37
COL6A1-206ENST00000498614 RTP1P59025 263 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 SP2Q02086 613 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 CAV1Q03135 178 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 EMC2Q15006 297 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 TMED2Q15363 201 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 TDRD10Q5VZ19 366 aaKnown RBP17.33■□□□□ 0.37
COL6A1-206ENST00000498614 PPP1R21Q6ZMI0 780 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 ENOSF1Q7L5Y1 443 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 MICAL1Q8TDZ2 1067 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 SPOCK2Q92563 424 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 GRAMD1AQ96CP6 724 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 ZBTB45Q96K62 511 aaPredicted RBP17.33■□□□□ 0.37
COL6A1-206ENST00000498614 TMEM237Q96Q45 408 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 EURLQ9NYK6 297 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 NEU2Q9Y3R4 380 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 SNCAIPQ9Y6H5 919 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 NFASCO94856 1347 aa17.33■□□□□ 0.37
COL6A1-206ENST00000498614 RASA4BC9J798 803 aa17.33■□□□□ 0.36
COL6A1-206ENST00000498614 RASA4O43374 803 aa17.33■□□□□ 0.36
COL6A1-206ENST00000498614 SPAG7O75391 227 aa17.33■□□□□ 0.36
COL6A1-206ENST00000498614 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.36
COL6A1-206ENST00000498614 MIS18BP1Q6P0N0 1132 aa17.33■□□□□ 0.36
COL6A1-206ENST00000498614 ATL2Q8NHH9 583 aa17.33■□□□□ 0.36
COL6A1-206ENST00000498614 GRK7Q8WTQ7 553 aa17.33■□□□□ 0.36
COL6A1-206ENST00000498614 RAB3IPQ96QF0 476 aaPredicted RBP17.33■□□□□ 0.36
COL6A1-206ENST00000498614 FAM167BQ9BTA0 163 aa17.33■□□□□ 0.36
COL6A1-206ENST00000498614 HAPLN2Q9GZV7 340 aa17.33■□□□□ 0.36
COL6A1-206ENST00000498614 ACAD9Q9H845 621 aa17.33■□□□□ 0.36
COL6A1-206ENST00000498614 TXLNGQ9NUQ3 528 aa17.33■□□□□ 0.36
COL6A1-206ENST00000498614 FAM47DPA6NHR8 397 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 ZC3H11AO75152 810 aaKnown RBP eCLIP17.32■□□□□ 0.36
COL6A1-206ENST00000498614 CFHP08603 1231 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 SUPT20HL2P0C7V6 817 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 MAN1A1P33908 653 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 IL9RQ01113 521 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 RNASELQ05823 741 aaKnown RBP17.32■□□□□ 0.36
COL6A1-206ENST00000498614 DNAJC3Q13217 504 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 XKR3Q5GH77 459 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 WDR44Q5JSH3 913 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 PASD1Q8IV76 773 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 MAML1Q92585 1016 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 ERP27Q96DN0 273 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 AGO2Q9UKV8 859 aaKnown RBP17.32■□□□□ 0.36
COL6A1-206ENST00000498614 CHKBQ9Y259 395 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 LRRIQ4A6NIV6 560 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 EIF4E1BA6NMX2 242 aaKnown RBP17.32■□□□□ 0.36
COL6A1-206ENST00000498614 SPATA31C2B4DYI2 1134 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 CLGNO14967 610 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 ATP4AP20648 1035 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 TARSP26639 723 aaKnown RBP17.32■□□□□ 0.36
COL6A1-206ENST00000498614 GCKP35557 465 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 OAZ1P54368 228 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 GRIK3Q13003 919 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 PSMD6Q15008 389 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 TAF11Q15544 211 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 GNPTABQ3T906 1256 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 ZACNQ401N2 412 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 ZBTB41Q5SVQ8 909 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 IZUMO3Q5VZ72 239 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 CAPRIN2Q6IMN6 1127 aaKnown RBP17.32■□□□□ 0.36
COL6A1-206ENST00000498614 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 ASAP3Q8TDY4 903 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 DDX27Q96GQ7 796 aaKnown RBP17.32■□□□□ 0.36
COL6A1-206ENST00000498614 CDHR1Q96JP9 859 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 TEX13BQ9BXU2 312 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 LRMDAQ9H2I8 198 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 ADAMTS5Q9UNA0 930 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 PCDHB2Q9Y5E7 798 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 ACTL7BQ9Y614 415 aa17.32■□□□□ 0.36
COL6A1-206ENST00000498614 VNN1O95497 513 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 C4BPAP04003 597 aaKnown RBP17.31■□□□□ 0.36
COL6A1-206ENST00000498614 NSFP46459 744 aaKnown RBP17.31■□□□□ 0.36
COL6A1-206ENST00000498614 FSTL1Q12841 308 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 BLMHQ13867 455 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 STAT4Q14765 748 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 CDCA2Q69YH5 1023 aaPredicted RBP17.31■□□□□ 0.36
COL6A1-206ENST00000498614 VSIG1Q86XK7 387 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 ANKRD35Q8N283 1001 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 MAIP1Q8WWC4 291 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 SLCO1B3Q9NPD5 702 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 ANKFY1Q9P2R3 1169 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 HAO1Q9UJM8 370 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 CSADQ9Y600 493 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 PPP1R12AO14974 1030 aaPredicted RBP17.31■□□□□ 0.36
COL6A1-206ENST00000498614 ASMTLO95671 621 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 RALAP11233 206 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 GNAZP19086 355 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 IREB2P48200 963 aaKnown RBP17.31■□□□□ 0.36
COL6A1-206ENST00000498614 OTUD5Q96G74 571 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 CCDC77Q9BR77 488 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 PHTF1Q9UMS5 762 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 STARD13Q9Y3M8 1113 aa17.31■□□□□ 0.36
COL6A1-206ENST00000498614 H0YCG3 227 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms