RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 FBXL13Q8NEE6 735 aa17.39■□□□□ 0.37
FAM3A-220ENST00000497506 OR10T2Q8NGX3 314 aa17.39■□□□□ 0.37
FAM3A-220ENST00000497506 SPATA18Q8TC71 538 aa17.39■□□□□ 0.37
FAM3A-220ENST00000497506 KBTBD7Q8WVZ9 684 aa17.39■□□□□ 0.37
FAM3A-220ENST00000497506 TMEM209Q96SK2 561 aa17.39■□□□□ 0.37
FAM3A-220ENST00000497506 PI4K2AQ9BTU6 479 aa17.39■□□□□ 0.37
FAM3A-220ENST00000497506 THEGQ9P2T0 379 aa17.39■□□□□ 0.37
FAM3A-220ENST00000497506 NXF1Q9UBU9 619 aaKnown RBP17.39■□□□□ 0.37
FAM3A-220ENST00000497506 POLIQ9UNA4 740 aa17.39■□□□□ 0.37
FAM3A-220ENST00000497506 SYCE3A1L190 88 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 PMM2O15305 246 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 TACC1O75410 805 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 FAM163BP0C2L3 166 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 OR4Q2P0C623 313 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 SRGAP2BP0DMP2 458 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 ARPP19P56211 112 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 TNNC1P63316 161 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 ZNF667Q5HYK9 610 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 SPOPLQ6IQ16 392 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 ADGRF2Q8IZF7 708 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 THEM5Q8N1Q8 247 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 KREMEN2Q8NCW0 462 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 ZNF461Q8TAF7 563 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 HDAC7Q8WUI4 952 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 MMS19Q96T76 1030 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 PLEKHA4Q9H4M7 779 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 APOBEC3GQ9HC16 384 aaKnown RBP17.38■□□□□ 0.37
FAM3A-220ENST00000497506 MAN1C1Q9NR34 630 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 SAMSN1Q9NSI8 373 aaKnown RBP17.38■□□□□ 0.37
FAM3A-220ENST00000497506 DZANK1Q9NVP4 752 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 RAB20Q9NX57 234 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 FBXW11Q9UKB1 542 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 NFE2L3Q9Y4A8 694 aa17.38■□□□□ 0.37
FAM3A-220ENST00000497506 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.38■□□□□ 0.37
FAM3A-220ENST00000497506 HCRTO43612 131 aa17.37■□□□□ 0.37
FAM3A-220ENST00000497506 HOXB8P17481 243 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-220ENST00000497506 WARSP23381 471 aaKnown RBP17.37■□□□□ 0.37
FAM3A-220ENST00000497506 LHX1P48742 406 aa17.37■□□□□ 0.37
FAM3A-220ENST00000497506 KCNH2Q12809 1159 aa17.37■□□□□ 0.37
FAM3A-220ENST00000497506 LEXMQ3ZCV2 418 aa17.37■□□□□ 0.37
FAM3A-220ENST00000497506 ANO6Q4KMQ2 910 aa17.37■□□□□ 0.37
FAM3A-220ENST00000497506 TPGS2Q68CL5 300 aa17.37■□□□□ 0.37
FAM3A-220ENST00000497506 C12orf76Q8N812 135 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-220ENST00000497506 MRPL45Q9BRJ2 306 aaKnown RBP17.37■□□□□ 0.37
FAM3A-220ENST00000497506 ZCWPW1Q9H0M4 648 aa17.37■□□□□ 0.37
FAM3A-220ENST00000497506 SDCBP2Q9H190 292 aa17.37■□□□□ 0.37
FAM3A-220ENST00000497506 S1PR5Q9H228 398 aa17.37■□□□□ 0.37
FAM3A-220ENST00000497506 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.37■□□□□ 0.372e-11■■■■■ 173.1
FAM3A-220ENST00000497506 DDX43Q9NXZ2 648 aaKnown RBP17.37■□□□□ 0.37
FAM3A-220ENST00000497506 NME7Q9Y5B8 376 aa17.37■□□□□ 0.37
FAM3A-220ENST00000497506 VNN2O95498 520 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 AFPP02771 609 aaKnown RBP17.36■□□□□ 0.37
FAM3A-220ENST00000497506 CPB1P15086 417 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 ATF2P15336 505 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 LMO2P25791 158 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 ASPAP45381 313 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 CDH8P55286 799 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 NOP14P78316 857 aaKnown RBP17.36■□□□□ 0.37
FAM3A-220ENST00000497506 MYL7Q01449 175 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 GPR17Q13304 367 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 CLUL1Q15846 466 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 ZSCAN23Q3MJ62 389 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 HSP90AA4PQ58FG1 418 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 RNF19BQ6ZMZ0 732 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 LRRTM3Q86VH5 581 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 CREBRFQ8IUR6 639 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 FAM114A1Q8IWE2 563 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.36■□□□□ 0.37
FAM3A-220ENST00000497506 FEZF2Q8TBJ5 459 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 ACBD6Q9BR61 282 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 IMPG2Q9BZV3 1241 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 SMYD3Q9H7B4 428 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 AFF4Q9UHB7 1163 aaKnown RBP17.36■□□□□ 0.37
FAM3A-220ENST00000497506 DPP7Q9UHL4 492 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 CD207Q9UJ71 328 aa17.36■□□□□ 0.37
FAM3A-220ENST00000497506 SPTBN5Q9NRC6 3674 aaKnown RBP17.36■□□□□ 0.37
FAM3A-220ENST00000497506 P4HA2O15460 535 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 N4BP1O75113 896 aaKnown RBP17.35■□□□□ 0.37
FAM3A-220ENST00000497506 ZMYND10O75800 440 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 PAPLNO95428 1278 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 SEC24AO95486 1093 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 ACAT1P24752 427 aaKnown RBP17.35■□□□□ 0.37
FAM3A-220ENST00000497506 MTIF2P46199 727 aaKnown RBP17.35■□□□□ 0.37
FAM3A-220ENST00000497506 RAP1GAPP47736 663 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 MYL5Q02045 173 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 NCAPHQ15003 741 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 CDKAL1Q5VV42 579 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 SCARA5Q6ZMJ2 495 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 TCEAL8Q8IYN2 117 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 SMRP1Q8NCR6 262 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 LMO3Q8TAP4 145 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 PKMYT1Q99640 499 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 APOL5Q9BWW9 433 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 BCO2Q9BYV7 579 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 SFXN1Q9H9B4 322 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 FANCLQ9NW38 375 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 MAFFQ9ULX9 164 aa17.35■□□□□ 0.37
FAM3A-220ENST00000497506 XIRP2A4UGR9 3374 aa17.34■□□□□ 0.37
FAM3A-220ENST00000497506 GRXCR2A6NFK2 248 aa17.34■□□□□ 0.37
FAM3A-220ENST00000497506 KCNJ18B7U540 433 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms