RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 C1orf43Q9BWL3 253 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 OR10A4Q9H209 315 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 TP63Q9H3D4 680 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-224ENST00000497488 EPS8L2Q9H6S3 715 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 CCDC177Q9NQR7 707 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-224ENST00000497488 MTRRQ9UBK8 725 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 TMEM5Q9Y2B1 443 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 RPTORQ8N122 1335 aa6.74□□□□□ -1.33
BRCA1-224ENST00000497488 ABCA5Q8WWZ7 1642 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 CCDC78A2IDD5 438 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 H3BNC9 293 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 ERAL1O75616 437 aaKnown RBP6.73□□□□□ -1.33
BRCA1-224ENST00000497488 USP1O94782 785 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 CSH1P0DML2 217 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 CSH2P0DML3 217 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 IL1R2P27930 398 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 ECHS1P30084 290 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 KCNJ5P48544 419 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 AFF3P51826 1226 aaKnown RBP6.73□□□□□ -1.33
BRCA1-224ENST00000497488 ZNF131P52739 623 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 NLRP5P59047 1200 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 ZNF200P98182 395 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-224ENST00000497488 MC1RQ01726 317 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 CHAF1BQ13112 559 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 CTBP1Q13363 440 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 NAA16Q6N069 864 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-224ENST00000497488 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-224ENST00000497488 Q6ZVL8 140 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 RRAGAQ7L523 313 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 DNAJB7Q7Z6W7 309 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-224ENST00000497488 TEX9Q8N6V9 391 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 AVL9Q8NBF6 648 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 GALNT6Q8NCL4 622 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 OR56A3Q8NH54 315 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 CCHCR1Q8TD31 782 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 MGARPQ8TDB4 240 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 ACDQ96AP0 544 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 JMJD8Q96S16 334 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 RBM15Q96T37 977 aaKnown RBP eCLIP6.73□□□□□ -1.33
BRCA1-224ENST00000497488 CEP41Q9BYV8 373 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 EDEM3Q9BZQ6 932 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 PCDHAC1Q9H158 963 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 NOD2Q9HC29 1040 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 A1CFQ9NQ94 594 aaKnown RBP6.73□□□□□ -1.33
BRCA1-224ENST00000497488 PA2G4Q9UQ80 394 aaKnown RBP6.73□□□□□ -1.33
BRCA1-224ENST00000497488 PCDHGB5Q9Y5G0 923 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 MYBBP1AQ9BQG0 1328 aaKnown RBP6.73□□□□□ -1.33
BRCA1-224ENST00000497488 IRS2Q9Y4H2 1338 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 CHD1O14646 1710 aa6.73□□□□□ -1.33
BRCA1-224ENST00000497488 FAM95CA0A1B0GW59 222 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 TCRBV5S2A0A599 114 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 AGAP14A8MT82 685 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 PI4K2BG5E9Z4 385 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 TBCAO75347 108 aaKnown RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 TSPAN9O75954 239 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 TGDSO95455 350 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 GLP2RO95838 553 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 AMY1AP04745 511 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 SLURP2P0DP57 97 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 LAMP2P13473 410 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 FUT4P22083 530 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 ADSLP30566 484 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 ACSL1P33121 698 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 ABCD1P33897 745 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 ATP6V1E1P36543 226 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 BCAT1P54687 386 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 TMF1P82094 1093 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 MEF2AQ02078 507 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 MAMLD1Q13495 774 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 HABP2Q14520 560 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 ANKRD1Q15327 319 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 TTC31Q49AM3 519 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 ZNF362Q5T0B9 420 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 ATPAF1Q5TC12 328 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 CDKAL1Q5VV42 579 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 MFSD5Q6N075 450 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 SLC22A25Q6T423 547 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 H1FNTQ75WM6 255 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 PXKQ7Z7A4 578 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 CPLX4Q7Z7G2 160 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 KRT73Q86Y46 540 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 ERC1Q8IUD2 1116 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 BRSK2Q8IWQ3 736 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 ADSSL1Q8N142 457 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 ZGPATQ8N5A5 531 aaKnown RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 KCNG4Q8TDN1 519 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 TNPO1Q92973 898 aaKnown RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 CYFIP2Q96F07 1278 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 FAM46AQ96IP4 442 aaKnown RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 FEM1CQ96JP0 617 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 EYA3Q99504 573 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 AMNQ9BXJ7 453 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 CXorf56Q9H5V9 222 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 HEYLQ9NQ87 328 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 G6PC2Q9NQR9 355 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 SEPT11Q9NVA2 429 aaKnown RBP6.72□□□□□ -1.33
BRCA1-224ENST00000497488 KCMF1Q9P0J7 381 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 TNFRSF10DQ9UBN6 386 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 MID2Q9UJV3 735 aa6.72□□□□□ -1.33
BRCA1-224ENST00000497488 ZMYND8Q9ULU4 1186 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms