RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 DHTKD1Q96HY7 919 aaPredicted RBP12.34□□□□□ -0.43
HLA-B-254ENST00000497377 TSG101Q99816 390 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 MKNK1Q9BUB5 465 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 PHF7Q9BWX1 381 aaPredicted RBP12.34□□□□□ -0.43
HLA-B-254ENST00000497377 COL25A1Q9BXS0 654 aaPredicted RBP12.34□□□□□ -0.43
HLA-B-254ENST00000497377 GDAP2Q9NXN4 497 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 SIX4Q9UIU6 781 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 MAN1B1Q9UKM7 699 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 C5orf42Q9H799 3197 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 PTPRJQ12913 1337 aa12.34□□□□□ -0.43
HLA-B-254ENST00000497377 VCANP13611 3396 aa12.33□□□□□ -0.43
HLA-B-254ENST00000497377 TSC2P49815 1807 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 CCDC195A0A1B0GUA6 201 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 IKBKBO14920 756 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 CETN3O15182 167 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 HUS1O60921 280 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 ABLIM3O94929 683 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 POU2F2P09086 479 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 KRT13P13646 458 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 ATF2P15336 505 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 ELF1P32519 619 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 PSMC2P35998 433 aaKnown RBP12.33□□□□□ -0.44
HLA-B-254ENST00000497377 ROR1Q01973 937 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 ZP2Q05996 745 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 BFSP1Q12934 665 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 LMBRD2Q68DH5 695 aaPredicted RBP12.33□□□□□ -0.44
HLA-B-254ENST00000497377 TMC5Q6UXY8 1006 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 INTS8Q75QN2 995 aaKnown RBP12.33□□□□□ -0.44
HLA-B-254ENST00000497377 DPH6Q7L8W6 267 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 ADSSL1Q8N142 457 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 THEM5Q8N1Q8 247 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 TMEM86AQ8N2M4 240 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 C12orf76Q8N812 135 aaPredicted RBP12.33□□□□□ -0.44
HLA-B-254ENST00000497377 ERCC4Q92889 916 aaPredicted RBP12.33□□□□□ -0.44
HLA-B-254ENST00000497377 HPDLQ96IR7 371 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 APOL5Q9BWW9 433 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 PRKD2Q9BZL6 878 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 KIAA1468Q9P260 1216 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 AFF4Q9UHB7 1163 aaKnown RBP12.33□□□□□ -0.44
HLA-B-254ENST00000497377 TIMM13Q9Y5L4 95 aaPredicted RBP12.33□□□□□ -0.44
HLA-B-254ENST00000497377 TTC28Q96AY4 2481 aa12.33□□□□□ -0.44
HLA-B-254ENST00000497377 SPTBN5Q9NRC6 3674 aaKnown RBP12.32□□□□□ -0.44
HLA-B-254ENST00000497377 WDR27A2RRH5 827 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 DLL1O00548 723 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 PHACTR2O75167 634 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 XYLBO75191 536 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 STAU1O95793 577 aaKnown RBP12.32□□□□□ -0.44
HLA-B-254ENST00000497377 C8AP07357 584 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 FAM163BP0C2L3 166 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 SPATA31D3P0C874 917 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
HLA-B-254ENST00000497377 CPB1P15086 417 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 CCNE1P24864 410 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 ATICP31939 592 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 CASP4P49662 377 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 VAMP7P51809 220 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 FKBP3Q00688 224 aaKnown RBP12.32□□□□□ -0.44
HLA-B-254ENST00000497377 SMARCB1Q12824 385 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 TRPC3Q13507 836 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 MORC3Q14149 939 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 PPM1LQ5SGD2 360 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 SPATA31D4Q6ZUB0 917 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 FAM186BQ8IYM0 893 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 TCEAL8Q8IYN2 117 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 TOP6BLQ8N6T0 577 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 SMG7Q92540 1137 aaKnown RBP12.32□□□□□ -0.44
HLA-B-254ENST00000497377 SYAP1Q96A49 352 aaPredicted RBP12.32□□□□□ -0.44
HLA-B-254ENST00000497377 GZF1Q9H116 711 aaPredicted RBP12.32□□□□□ -0.44
HLA-B-254ENST00000497377 LMBRD1Q9NUN5 540 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 NR2E1Q9Y466 385 aa12.32□□□□□ -0.44
HLA-B-254ENST00000497377 C2orf16Q68DN1 1984 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 BICDL2A1A5D9 508 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 LRRIQ3A6PVS8 624 aaPredicted RBP12.31□□□□□ -0.44
HLA-B-254ENST00000497377 PRRG1O14668 218 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 SLC16A3O15427 465 aaKnown RBP12.31□□□□□ -0.44
HLA-B-254ENST00000497377 RFPL2O75678 378 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 AKAP3O75969 853 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 LHX1P48742 406 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 PTPN5P54829 565 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 ARPP19P56211 112 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 MCCD1P59942 119 aaPredicted RBP12.31□□□□□ -0.44
HLA-B-254ENST00000497377 GPR17Q13304 367 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 BIRC3Q13489 604 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 WSCD1Q658N2 575 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 ZC3H3Q8IXZ2 948 aaKnown RBP12.31□□□□□ -0.44
HLA-B-254ENST00000497377 GJD3Q8N144 294 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 SLC7A14Q8TBB6 771 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 PLEKHO2Q8TD55 490 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 ZNF516Q92618 1163 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 ZNF707Q96C28 371 aaPredicted RBP12.31□□□□□ -0.44
HLA-B-254ENST00000497377 CLSTN2Q9H4D0 955 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 POMKQ9H5K3 350 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 PIDD1Q9HB75 910 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 HSFX1Q9UBD0 423 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 USTQ9Y2C2 406 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 PCDHGA10Q9Y5H3 936 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 SNX9Q9Y5X1 595 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 DENND4AQ7Z401 1863 aa12.31□□□□□ -0.44
HLA-B-254ENST00000497377 CUL9Q8IWT3 2517 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms