RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 KRT18P05783 430 aaKnown RBP18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 RETP07949 1114 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 CCNE1P24864 410 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 CDC25CP30307 473 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 TNFSF9P41273 254 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 KPNA1P52294 538 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 TMEM132DQ14C87 1099 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 C9orf57Q5W0N0 161 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 THEM5Q8N1Q8 247 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 FAM200AQ8TCP9 573 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 HVCN1Q96D96 273 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 TMX3Q96JJ7 454 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 PGLYRP2Q96PD5 576 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 GCNAQ96QF7 691 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 RTKNQ9BST9 563 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 TASP1Q9H6P5 420 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 THG1LQ9NWX6 298 aaKnown RBP18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 NPHP3-ACAD11A0A0J9YXS1 232 aa18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 GJB2P29033 226 aa18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 SPAG1Q07617 926 aa18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 JADE1Q6IE81 842 aa18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 TSSK4Q6SA08 328 aa18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 KRI1Q8N9T8 703 aaKnown RBP18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 ATAD1Q8NBU5 361 aa18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 RASSF8Q8NHQ8 419 aa18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 SPPL2BQ8TCT7 592 aa18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 RAD54LQ92698 747 aa18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 ATXN3LQ9H3M9 355 aa18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 CDV3Q9UKY7 258 aaKnown RBP18.23■□□□□ 0.51
TRAPPC3-207ENST00000497251 CACNA1BQ00975 2339 aa18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 EPG5Q9HCE0 2579 aa18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 GJA1P17302 382 aa18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 DDX6P26196 483 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 DDIT3P35638 169 aa18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 GAREM2Q75VX8 874 aa18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 ZCWPW1Q9H0M4 648 aa18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 CRISPLD1Q9H336 500 aa18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 BLOC1S4Q9NUP1 217 aa18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 SEL1LQ9UBV2 794 aa18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 SMC3Q9UQE7 1217 aa18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 SLC27A5Q9Y2P5 690 aa18.22■□□□□ 0.51
TRAPPC3-207ENST00000497251 MED19A0JLT2 244 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 IL18RAPO95256 599 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 OR4Q2P0C623 313 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 TGM1P22735 817 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 GABRR2P28476 465 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 CTHP32929 405 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 PNPLA4P41247 253 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 TAF6P49848 677 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 AMPD2Q01433 879 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 CACNB1Q02641 598 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 TAF12Q16514 161 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 GPR158Q5T848 1215 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 LARP1BQ659C4 914 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 ADALQ6DHV7 355 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 LONP2Q86WA8 852 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 DCP1BQ8IZD4 617 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 BPIFB1Q8TDL5 484 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 LARP4BQ92615 738 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 FAM212AQ96EL1 285 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 FIZ1Q96SL8 496 aa18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 AGO2Q9UKV8 859 aaKnown RBP18.21■□□□□ 0.51
TRAPPC3-207ENST00000497251 CNOT1A5YKK6 2376 aaKnown RBP18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 CCDC163A0A0D9SF12 145 aa18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 SPECC1L-ADORA2AF8WAN1 911 aa18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 NRG2O14511 850 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 CYB561D2O14569 222 aa18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 PLCG1P19174 1290 aa18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 ATXN1P54253 815 aaKnown RBP18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 SPATA18Q8TC71 538 aa18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 EXOC4Q96A65 974 aa18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 MKNK1Q9BUB5 465 aa18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 STK17AQ9UEE5 414 aa18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 USP18Q9UMW8 372 aa18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 EXOC7Q9UPT5 735 aa18.2■□□□□ 0.5
TRAPPC3-207ENST00000497251 COL4A3Q01955 1670 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 COL4A2P08572 1712 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 NFICP08651 508 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 SIM2Q14190 667 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 DHX8Q14562 1220 aaKnown RBP18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 MCM6Q14566 821 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 NFE2Q16621 373 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 ITPRIPL2Q3MIP1 535 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 MGAT5BQ3V5L5 792 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 SV2CQ496J9 727 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 SLC39A12Q504Y0 691 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 SLC39A4Q6P5W5 647 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 ZNF720Q7Z2F6 126 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 NETO1Q8TDF5 533 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 RSPRY1Q96DX4 576 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 ZNF560Q96MR9 790 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 ZHX3Q9H4I2 956 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 KIF9Q9HAQ2 790 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 DPP3Q9NY33 737 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 CCDC39Q9UFE4 941 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 TICRRQ7Z2Z1 1910 aa18.19■□□□□ 0.5
TRAPPC3-207ENST00000497251 SLC38A8A6NNN8 435 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 PPEF2O14830 753 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 ATG13O75143 517 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 LDHAP00338 332 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms