RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 H0Y3Z8 333 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ACOT7O00154 380 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 IGF2BP3O00425 579 aaKnown RBP eCLIP2.13□□□□□ -2.07
UBR4-217ENST00000497018 SPTLC2O15270 562 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ST8SIA5O15466 376 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 SART1O43290 800 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 DHHO43323 396 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 THAP12O43422 761 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 NPHS1O60500 1241 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 SLC22A3O75751 556 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ACTL6BO94805 426 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 GOSR1O95249 250 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ABHD16AO95870 558 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 F9P00740 461 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 TUBB4AP04350 444 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 CLEC3BP05452 202 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 PRKCBP05771 671 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 APOA4P06727 396 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ITGA2BP08514 1039 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 EPXP11678 715 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ALAS1P13196 640 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 NPPBP16860 134 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 EGR1P18146 543 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 MALP21145 153 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ABCD3P28288 659 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 PRDX5P30044 214 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 TNNT3P45378 269 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 TDO2P48775 406 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 PPP5CP53041 499 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 NLRP5P59047 1200 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 RNASE9P60153 205 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 ARF3P61204 181 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 DLG4P78352 724 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ARF1P84077 181 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 SRSF11Q05519 484 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 TNK2Q07912 1038 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 GALNT2Q10471 571 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 SNAPC2Q13487 334 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 SMC1AQ14683 1233 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 RAB39AQ14964 217 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 TBCCQ15814 346 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 GAB4Q2WGN9 574 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 NRN1LQ496H8 165 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 DUSP28Q4G0W2 176 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 CTXN3Q4LDR2 81 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 KHDC1Q4VXA5 237 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 VWA3BQ502W6 1294 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 KRTCAP3Q53RY4 240 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 CCDC178Q5BJE1 867 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 TTC38Q5R3I4 469 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 GJC2Q5T442 439 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 TMTC4Q5T4D3 741 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ARL6IP4Q66PJ3 421 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 ANKRD34AQ69YU3 496 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 TIGD7Q6NT04 549 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 IL27RAQ6UWB1 636 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 UNC5DQ6UXZ4 953 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 CYP2R1Q6VVX0 501 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ZNF783Q6ZMS7 281 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 KIAA0408Q6ZU52 694 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 DENND5BQ6ZUT9 1274 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 UNC13DQ70J99 1090 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 CHSY3Q70JA7 882 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 CEP68Q76N32 757 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 CATSPER4Q7RTX7 472 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 KRT28Q7Z3Y7 464 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 SZRD1Q7Z422 152 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 KDELC2Q7Z4H8 507 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 R3HCC1LQ7Z5L2 792 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 DNAJB7Q7Z6W7 309 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 EPHX4Q8IUS5 362 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 SLC44A2Q8IWA5 706 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 RPAP2Q8IXW5 612 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 CEP57L1Q8IYX8 460 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 TOP6BLQ8N6T0 577 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 USHBP1Q8N6Y0 703 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 DCBLD1Q8N8Z6 715 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 C12orf50Q8NA57 414 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 OR56A3Q8NH54 315 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 CEP70Q8NHQ1 597 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.13□□□□□ -2.07
UBR4-217ENST00000497018 SCAMP5Q8TAC9 235 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 PIWIL2Q8TC59 973 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 SLC16A10Q8TF71 515 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 AFG1LQ8WV93 481 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 CCDC34Q96HJ3 373 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 COG8Q96MW5 612 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 TSGA13Q96PP4 275 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 GBP4Q96PP9 640 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 PPP1R9BQ96SB3 815 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 REEP2Q9BRK0 252 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 USP44Q9H0E7 712 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 DUSP15Q9H1R2 295 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 MRPL46Q9H2W6 279 aaKnown RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 TP63Q9H3D4 680 aaPredicted RBP2.13□□□□□ -2.07
UBR4-217ENST00000497018 SEMA6CQ9H3T2 930 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 ABHD16BQ9H3Z7 469 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 WDCPQ9H6R7 721 aa2.13□□□□□ -2.07
UBR4-217ENST00000497018 EPS8L2Q9H6S3 715 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms