RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 LIN9Q5TKA1 542 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 C9orf57Q5W0N0 161 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 AADACL2Q6P093 401 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 TMEM35BQ8NCS4 154 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 BEST2Q8NFU1 509 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 RNPC3Q96LT9 517 aaKnown RBP14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 KRT12Q99456 494 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 AP1M1Q9BXS5 423 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 ZNF518BQ9C0D4 1074 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 WNT8AQ9H1J5 351 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 ARFGAP3Q9NP61 516 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 PARP2Q9UGN5 583 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 DDX20Q9UHI6 824 aaKnown RBP14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 CYTH4Q9UIA0 394 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 ST3GAL5Q9UNP4 418 aa14.54□□□□□ -0.08
SPTBN1-205ENST00000496323 TCRBV5S1A1TA0A578 114 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 M0QZ92 97 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 FGGP02679 453 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 HOXD10P28358 340 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 CTNNA1P35221 906 aaKnown RBP14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 VEGFBP49765 207 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 MYO1EQ12965 1108 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 LONRF2Q1L5Z9 754 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 TWF2Q6IBS0 349 aaKnown RBP14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 PPP1R2P3Q6NXS1 205 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 RSPH3Q86UC2 560 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 LHX5Q9H2C1 402 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 BARX2Q9UMQ3 279 aaPredicted RBP14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 NR2E1Q9Y466 385 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 SPOPO43791 374 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 RPS6KA5O75582 802 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 MYBL2P10244 700 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 CTNNA2P26232 953 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 NDST1P52848 882 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 SOX4Q06945 474 aaPredicted RBP14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 PTGISQ16647 500 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 LRRC52Q8N7C0 313 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 UBL4BQ8N7F7 174 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 AGO3Q9H9G7 860 aaKnown RBP14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 UBQLN1Q9UMX0 589 aaKnown RBP14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 NME7Q9Y5B8 376 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 PCDHA3Q9Y5H8 950 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 SNX9Q9Y5X1 595 aa14.53□□□□□ -0.08
SPTBN1-205ENST00000496323 MYO1FO00160 1098 aa14.52□□□□□ -0.08
SPTBN1-205ENST00000496323 PIRO00625 290 aa14.52□□□□□ -0.08
SPTBN1-205ENST00000496323 SASH3O75995 380 aa14.52□□□□□ -0.08
SPTBN1-205ENST00000496323 MAP2K2P36507 400 aa14.52□□□□□ -0.08
SPTBN1-205ENST00000496323 GLE1Q53GS7 698 aaKnown RBP14.52□□□□□ -0.08
SPTBN1-205ENST00000496323 C8orf74Q6P047 294 aa14.52□□□□□ -0.08
SPTBN1-205ENST00000496323 PCSK9Q8NBP7 692 aaKnown RBP14.52□□□□□ -0.08
SPTBN1-205ENST00000496323 RAET1EQ8TD07 263 aa14.52□□□□□ -0.08
SPTBN1-205ENST00000496323 PXYLP1Q8TE99 480 aa14.52□□□□□ -0.08
SPTBN1-205ENST00000496323 MRPL45Q9BRJ2 306 aaKnown RBP14.52□□□□□ -0.08
SPTBN1-205ENST00000496323 PARVAQ9NVD7 372 aa14.52□□□□□ -0.08
SPTBN1-205ENST00000496323 MEIS3P2A8K0S8 358 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 KRIT1O00522 736 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 PTGESO14684 152 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 MED7O43513 233 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 GLI1P08151 1106 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 PYGMP11217 842 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 THPOP40225 353 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 RPL7AP62424 266 aaKnown RBP14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 HTRA3P83110 453 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 NFX1Q12986 1120 aaKnown RBP14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 PTPN20Q4JDL3 420 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 DAB2IPQ5VWQ8 1189 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 CCNI2Q6ZMN8 369 aaPredicted RBP14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 KLHL7Q8IXQ5 586 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 FUT8Q9BYC5 575 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 FAM124BQ9H5Z6 455 aaPredicted RBP14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 GOLGA2P5Q9HBQ8 144 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 MRPL47Q9HD33 250 aaKnown RBP14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 TRMT13Q9NUP7 481 aaKnown RBP14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 STIM2Q9P246 746 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 TJP2Q9UDY2 1190 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 L1RE1Q9UN81 338 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 TRIP12Q14669 1992 aaPredicted RBP14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 CEP350Q5VT06 3117 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 CCDC66A2RUB6 948 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 O00370 1275 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 SPTLC1O15269 473 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 TLR3O15455 904 aaKnown RBP14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 RRP9O43818 475 aaKnown RBP14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 MICAL2O94851 1124 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 PROSCO94903 275 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 CALB1P05937 261 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 CYP3A5P20815 502 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 ACLYP53396 1101 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 ITGA7Q13683 1181 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 CYP4A22Q5TCH4 519 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 CCDC70Q6NSX1 233 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 ERICH1Q86X53 443 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 FEZF2Q8TBJ5 459 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 HEXIM2Q96MH2 286 aaKnown RBP14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 ZFP42Q96MM3 310 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 PLEKHA4Q9H4M7 779 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 FAM53CQ9NYF3 392 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 SCINQ9Y6U3 715 aa14.51□□□□□ -0.09
SPTBN1-205ENST00000496323 THSD7BQ9C0I4 1608 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms