RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 XYLT2Q9H1B5 865 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 SNX25Q9H3E2 840 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 TSPY26PQ9H489 355 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 RXFP1Q9HBX9 757 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.37□□□□□ -0.756e-8■■■■■ 55.9
PRPF3-207ENST00000496202 SAMSN1Q9NSI8 373 aaKnown RBP10.37□□□□□ -0.75
PRPF3-207ENST00000496202 FANCLQ9NW38 375 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 RAB20Q9NX57 234 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 MTRRQ9UBK8 725 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 L1RE1Q9UN81 338 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 STXBP5LQ9Y2K9 1186 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 BACE2Q9Y5Z0 518 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 GOLGA6L19H0YKK7 550 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 CLASP2O75122 1294 aaKnown RBP10.36□□□□□ -0.75
PRPF3-207ENST00000496202 OAZ2O95190 189 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 TRIM21P19474 475 aaKnown RBP10.36□□□□□ -0.75
PRPF3-207ENST00000496202 PCSK1P29120 753 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 OR1D2P34982 312 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 LHX1P48742 406 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 MCCD1P59942 119 aaPredicted RBP10.36□□□□□ -0.75
PRPF3-207ENST00000496202 TSPY1Q01534 308 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 HYAL1Q12794 435 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 TCP11X2Q5H9J9 407 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 CDKAL1Q5VV42 579 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 SCARA3Q6AZY7 606 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 LLGL2Q6P1M3 1020 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 DPH6Q7L8W6 267 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 IRF2BP1Q8IU81 584 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 PDCL2Q8N4E4 241 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 EFHBQ8N7U6 833 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 LNX1Q8TBB1 728 aaPredicted RBP10.36□□□□□ -0.75
PRPF3-207ENST00000496202 TUBGCP2Q9BSJ2 902 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 DNAI2Q9GZS0 605 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 VRTNQ9H8Y1 702 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 CLDND1Q9NY35 253 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 TAB2Q9NYJ8 693 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 GCNT4Q9P109 453 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 DPP7Q9UHL4 492 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 FBXL5Q9UKA1 691 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 POLIQ9UNA4 740 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 CDY1Q9Y6F8 540 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 PLXNA3P51805 1871 aa10.36□□□□□ -0.75
PRPF3-207ENST00000496202 MTCL1Q9Y4B5 1905 aaKnown RBP10.35□□□□□ -0.75
PRPF3-207ENST00000496202 PMM2O15305 246 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 LILRB3O75022 631 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 GTF2F1P35269 517 aaKnown RBP eCLIP10.35□□□□□ -0.754e-16■■■■■ 65
PRPF3-207ENST00000496202 MRPL58Q14197 206 aaKnown RBP10.35□□□□□ -0.75
PRPF3-207ENST00000496202 KRT31Q15323 416 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 SOWAHAQ2M3V2 549 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 VWA3BQ502W6 1294 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 LIN9Q5TKA1 542 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 SPOPLQ6IQ16 392 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 LRSAM1Q6UWE0 723 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 GBP6Q6ZN66 633 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 PALB2Q86YC2 1186 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 DHX40Q8IX18 779 aaKnown RBP10.35□□□□□ -0.75
PRPF3-207ENST00000496202 OR6B3Q8NGW1 331 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 FAM200AQ8TCP9 573 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 CASP10Q92851 521 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 SEMA4DQ92854 862 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 ELMO3Q96BJ8 720 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 NT5C1BQ96P26 610 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 CLSTN3Q9BQT9 956 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 INTS2Q9H0H0 1204 aaKnown RBP10.35□□□□□ -0.75
PRPF3-207ENST00000496202 KDM4CQ9H3R0 1056 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 NDST4Q9H3R1 872 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 SMYD3Q9H7B4 428 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 CBX8Q9HC52 389 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 DZANK1Q9NVP4 752 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 DDX43Q9NXZ2 648 aaKnown RBP10.35□□□□□ -0.75
PRPF3-207ENST00000496202 COQ4Q9Y3A0 265 aa10.35□□□□□ -0.75
PRPF3-207ENST00000496202 MYH10P35580 1976 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 TACC1O75410 805 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 EPCAMP16422 314 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 WARSP23381 471 aaKnown RBP10.34□□□□□ -0.75
PRPF3-207ENST00000496202 TBXAS1P24557 533 aaPredicted RBP10.34□□□□□ -0.75
PRPF3-207ENST00000496202 ELF1P32519 619 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 GNL1P36915 607 aaPredicted RBP10.34□□□□□ -0.75
PRPF3-207ENST00000496202 RAP1GAPP47736 663 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 CLCN4P51793 760 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 YWHAEP62258 255 aaKnown RBP10.34□□□□□ -0.75
PRPF3-207ENST00000496202 ROR1Q01973 937 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 LRMPQ12912 555 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 RAB33AQ14088 237 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 NCAPHQ15003 741 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 EXOC3L4Q17RC7 722 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 FKBP15Q5T1M5 1219 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 TPGS2Q68CL5 300 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 SLC8B1Q6J4K2 584 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 DCP1BQ8IZD4 617 aaKnown RBP10.34□□□□□ -0.75
PRPF3-207ENST00000496202 PABPC5Q96DU9 382 aaKnown RBP10.34□□□□□ -0.75
PRPF3-207ENST00000496202 CRACR2AQ9BSW2 395 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 VPS16Q9H269 839 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 CYP3A43Q9HB55 503 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 MAN1C1Q9NR34 630 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 HCFC2Q9Y5Z7 792 aa10.34□□□□□ -0.75
PRPF3-207ENST00000496202 GTPBP10A4D1E9 387 aaKnown RBP10.33□□□□□ -0.76
PRPF3-207ENST00000496202 A8MXQ7 604 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 PRRG1O14668 218 aa10.33□□□□□ -0.76
PRPF3-207ENST00000496202 LINC01565O15544 149 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms