RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 CDH5P33151 784 aaPredicted RBP17.43■□□□□ 0.38
HLA-A-208ENST00000496081 PAK2Q13177 524 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 PPP1R2P3Q6NXS1 205 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
HLA-A-208ENST00000496081 WDTC1Q8N5D0 677 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 NOA1Q8NC60 698 aaKnown RBP17.43■□□□□ 0.38
HLA-A-208ENST00000496081 TMEM176AQ96HP8 235 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 MS4A14Q96JA4 679 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 RPGRIP1Q96KN7 1286 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 EPC1Q9H2F5 836 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 SMARCAL1Q9NZC9 954 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 ADAM22Q9P0K1 906 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 PHF24Q9UPV7 400 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 SNX9Q9Y5X1 595 aa17.43■□□□□ 0.38
HLA-A-208ENST00000496081 CES2O00748 559 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 KCNK3O14649 394 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 ITGA4P13612 1032 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 NDST1P52848 882 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 TUBB4BP68371 445 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 MESDQ14696 234 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 LLGL2Q6P1M3 1020 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 MMS22LQ6ZRQ5 1243 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 TTC39CQ8N584 583 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 ZFP42Q96MM3 310 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 UNC93B1Q9H1C4 597 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 GOLGA2P5Q9HBQ8 144 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 RNF14Q9UBS8 474 aa17.42■□□□□ 0.38
HLA-A-208ENST00000496081 A0A0U1RQG5 324 aaPredicted RBP17.41■□□□□ 0.38
HLA-A-208ENST00000496081 MED7O43513 233 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 MGEA5O60502 916 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 CAND2O75155 1236 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 CKBP12277 381 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 ATF7P17544 494 aaPredicted RBP17.41■□□□□ 0.38
HLA-A-208ENST00000496081 MMP8P22894 467 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 C1QBPQ07021 282 aaKnown RBP17.41■□□□□ 0.38
HLA-A-208ENST00000496081 DSC3Q14574 896 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 CCDC181Q5TID7 509 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 MRPL10Q7Z7H8 261 aaKnown RBP17.41■□□□□ 0.38
HLA-A-208ENST00000496081 PHLDB2Q86SQ0 1253 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 GPR161Q8N6U8 529 aaKnown RBP17.41■□□□□ 0.38
HLA-A-208ENST00000496081 TMEM35BQ8NCS4 154 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 C1orf131Q8NDD1 294 aaKnown RBP17.41■□□□□ 0.38
HLA-A-208ENST00000496081 GSTCDQ8NEC7 633 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 PBKQ96KB5 322 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 BTBD6Q96KE9 485 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 PPP1R10Q96QC0 940 aaKnown RBP17.41■□□□□ 0.38
HLA-A-208ENST00000496081 ZNF518BQ9C0D4 1074 aa17.41■□□□□ 0.38
HLA-A-208ENST00000496081 TMEM110-MUSTN1A8MSY1 372 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 KBTBD13C9JR72 458 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 DDX3YO15523 660 aaKnown RBP17.4■□□□□ 0.38
HLA-A-208ENST00000496081 PAFAH1B1P43034 410 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 CFAP221Q4G0U5 840 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 LIN9Q5TKA1 542 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 DENND1BQ6P3S1 775 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 HACE1Q8IYU2 909 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 LPPQ93052 612 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 MRPL45Q9BRJ2 306 aaKnown RBP17.4■□□□□ 0.38
HLA-A-208ENST00000496081 TRAIPQ9BWF2 469 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 PTPN22Q9Y2R2 807 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 SQORQ9Y6N5 450 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 ARVCFO00192 962 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 SPTLC1O15269 473 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 ZNF623O75123 536 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 VDRP11473 427 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 MLH1P40692 756 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 ITIH3Q06033 890 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 C2orf54Q08AI8 447 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 SOWAHAQ2M3V2 549 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 PLEKHA7Q6IQ23 1121 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 TRAF7Q6Q0C0 670 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 AGMOQ6ZNB7 445 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 USP38Q8NB14 1042 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 SPATA4Q8NEY3 305 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 HEXIM2Q96MH2 286 aaKnown RBP17.4■□□□□ 0.38
HLA-A-208ENST00000496081 RPS6KC1Q96S38 1066 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 GAD1Q99259 594 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 NT5C1AQ9BXI3 368 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 LHX5Q9H2C1 402 aa17.4■□□□□ 0.38
HLA-A-208ENST00000496081 KPNA7A9QM74 516 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 COMTP21964 271 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 LRPAP1P30533 357 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 PNPLA4P41247 253 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 TAF6P49848 677 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 RAB27AP51159 221 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 AFF1P51825 1210 aaKnown RBP17.39■□□□□ 0.37
HLA-A-208ENST00000496081 RBM10P98175 930 aaKnown RBP17.39■□□□□ 0.37
HLA-A-208ENST00000496081 MAMLD1Q13495 774 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 ZNF560Q96MR9 790 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 TRIM7Q9C029 511 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 ANKZF1Q9H8Y5 726 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 GDAP2Q9NXN4 497 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 ANAPC7Q9UJX3 599 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 GIT1Q9Y2X7 761 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 CEP83Q9Y592 693 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 NME7Q9Y5B8 376 aa17.39■□□□□ 0.37
HLA-A-208ENST00000496081 A0A0U1RQF3 1178 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 O00370 1275 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 CALB1P05937 261 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 CNGA2Q16280 664 aa17.38■□□□□ 0.37
HLA-A-208ENST00000496081 CPNE8Q86YQ8 564 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms