RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 FAM117BQ6P1L5 589 aa16.04■□□□□ 0.16
GAPDH-210ENST00000496049 PDXDC1Q6P996 788 aa16.04■□□□□ 0.16
GAPDH-210ENST00000496049 DCLRE1AQ6PJP8 1040 aa16.04■□□□□ 0.16
GAPDH-210ENST00000496049 CCDC112Q8NEF3 446 aa16.04■□□□□ 0.16
GAPDH-210ENST00000496049 PHOSPHO2Q8TCD6 241 aa16.04■□□□□ 0.16
GAPDH-210ENST00000496049 SYN2Q92777 582 aaPredicted RBP16.04■□□□□ 0.16
GAPDH-210ENST00000496049 PANX2Q96RD6 677 aa16.04■□□□□ 0.16
GAPDH-210ENST00000496049 MMS19Q96T76 1030 aa16.04■□□□□ 0.16
GAPDH-210ENST00000496049 COLEC11Q9BWP8 271 aa16.04■□□□□ 0.16
GAPDH-210ENST00000496049 NAA15Q9BXJ9 866 aaKnown RBP16.04■□□□□ 0.16
GAPDH-210ENST00000496049 FAM86C1Q9NVL1 165 aa16.04■□□□□ 0.16
GAPDH-210ENST00000496049 SNX9Q9Y5X1 595 aa16.04■□□□□ 0.16
GAPDH-210ENST00000496049 TMEM189-UBE2V1I3L0A0 370 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 TRAPPC3O43617 180 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 HUS1O60921 280 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 LRRN2O75325 713 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 B3GAT3O94766 335 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 KRT5P13647 590 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 FERP16591 822 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 KCNA5P22460 613 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 SOX5P35711 763 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 USP8P40818 1118 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 ASPAP45381 313 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 PTPN5P54829 565 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 ADKP55263 362 aaKnown RBP16.03■□□□□ 0.16
GAPDH-210ENST00000496049 JAM2P57087 298 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 LILRA4P59901 499 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 BTG3Q14201 252 aaPredicted RBP16.03■□□□□ 0.16
GAPDH-210ENST00000496049 DRAP1Q14919 205 aaPredicted RBP16.03■□□□□ 0.16
GAPDH-210ENST00000496049 SPOUT1Q5T280 376 aaKnown RBP16.03■□□□□ 0.16
GAPDH-210ENST00000496049 DPY19L2P1Q6NXN4 242 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 DSTYKQ6XUX3 929 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 SPRED2Q7Z698 418 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 COLGALT2Q8IYK4 626 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 TOP6BLQ8N6T0 577 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 BAP1Q92560 729 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 TATDN2Q93075 761 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 TRIM44Q96DX7 344 aaPredicted RBP16.03■□□□□ 0.16
GAPDH-210ENST00000496049 DNAJC7Q99615 494 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 BCO2Q9BYV7 579 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 GDAP2Q9NXN4 497 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 PTPRSQ13332 1948 aa16.03■□□□□ 0.16
GAPDH-210ENST00000496049 COL4A6Q14031 1691 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 PPEF2O14830 753 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 GJB5O95377 273 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 ODC1P11926 461 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 LAG3P18627 525 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 PTCRAQ6ISU1 281 aaPredicted RBP16.02■□□□□ 0.16
GAPDH-210ENST00000496049 ZNF280BQ86YH2 543 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 TC2NQ8N9U0 490 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 APPL2Q8NEU8 664 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.02■□□□□ 0.16
GAPDH-210ENST00000496049 SHC3Q92529 594 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 KREMEN1Q96MU8 473 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 AAASQ9NRG9 546 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 DSEQ9UL01 958 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 POLIQ9UNA4 740 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 INSL6Q9Y581 213 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 PCDHB4Q9Y5E5 795 aa16.02■□□□□ 0.16
GAPDH-210ENST00000496049 SCN1AP35498 2009 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 DDHD2O94830 711 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 KIF4AO95239 1232 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 ALDH2P05091 517 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 CD58P19256 250 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 ALDH7A1P49419 539 aaKnown RBP16.01■□□□□ 0.15
GAPDH-210ENST00000496049 BPIFB4P59827 614 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 TAP1Q03518 808 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 ELAVL2Q12926 359 aaKnown RBP16.01■□□□□ 0.15
GAPDH-210ENST00000496049 ARID5BQ14865 1188 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 IER5LQ5T953 404 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 DPH6Q7L8W6 267 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 METTL23Q86XA0 190 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 HERC6Q8IVU3 1022 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 TMEM86AQ8N2M4 240 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 ELMO3Q96BJ8 720 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 ZNF689Q96CS4 500 aaPredicted RBP16.01■□□□□ 0.15
GAPDH-210ENST00000496049 ARID3AQ99856 593 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 SMYD3Q9H7B4 428 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 RC3H2Q9HBD1 1191 aaKnown RBP16.01■□□□□ 0.15
GAPDH-210ENST00000496049 CISHQ9NSE2 258 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 CACNG4Q9UBN1 327 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 AJAP1Q9UKB5 411 aaPredicted RBP16.01■□□□□ 0.15
GAPDH-210ENST00000496049 FAN1Q9Y2M0 1017 aa16.01■□□□□ 0.15
GAPDH-210ENST00000496049 PRG3Q9Y2Y8 225 aaPredicted RBP16.01■□□□□ 0.15
GAPDH-210ENST00000496049 BZW2Q9Y6E2 419 aaKnown RBP16.01■□□□□ 0.15
GAPDH-210ENST00000496049 SF3B1O75533 1304 aaKnown RBP eCLIP16■□□□□ 0.15
GAPDH-210ENST00000496049 CYB561D2O14569 222 aa16■□□□□ 0.15
GAPDH-210ENST00000496049 LPXNO60711 386 aa16■□□□□ 0.15
GAPDH-210ENST00000496049 TADA2AO75478 443 aa16■□□□□ 0.15
GAPDH-210ENST00000496049 KRT37O76014 449 aa16■□□□□ 0.15
GAPDH-210ENST00000496049 GFPT2O94808 682 aa16■□□□□ 0.15
GAPDH-210ENST00000496049 SERPING1P05155 500 aa16■□□□□ 0.15
GAPDH-210ENST00000496049 DEKP35659 375 aaKnown RBP16■□□□□ 0.15
GAPDH-210ENST00000496049 AARSP49588 968 aaKnown RBP eCLIP16■□□□□ 0.15
GAPDH-210ENST00000496049 PDE6CP51160 858 aa16■□□□□ 0.15
GAPDH-210ENST00000496049 ARID5AQ03989 594 aa16■□□□□ 0.15
GAPDH-210ENST00000496049 GOLGA8FQ08AF8 430 aa16■□□□□ 0.15
GAPDH-210ENST00000496049 GOLGA8DPQ0D2H9 430 aa16■□□□□ 0.15
GAPDH-210ENST00000496049 LEXMQ3ZCV2 418 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms