RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 TJP3O95049 919 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 ACADSP16219 412 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 GARTP22102 1010 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 RPA3P35244 121 aaPredicted RBP12.55□□□□□ -0.4
TRIM2-209ENST00000494872 NPTX2P47972 431 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 RPS6P62753 249 aaKnown RBP12.55□□□□□ -0.4
TRIM2-209ENST00000494872 MCL1Q07820 350 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 MAMLD1Q13495 774 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 TSNAXIP1Q2TAA8 658 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 WDR44Q5JSH3 913 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 PLA2G4FQ68DD2 849 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 NAIF1Q69YI7 327 aaPredicted RBP12.55□□□□□ -0.4
TRIM2-209ENST00000494872 PHF13Q86YI8 300 aaPredicted RBP12.55□□□□□ -0.4
TRIM2-209ENST00000494872 CCDC125Q86Z20 511 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 ALLCQ8N6M5 410 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 RDM1Q8NG50 284 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 POMGNT1Q8WZA1 660 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 SPOCK2Q92563 424 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 NTPCRQ9BSD7 190 aaKnown RBP12.55□□□□□ -0.4
TRIM2-209ENST00000494872 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 HOMER2Q9NSB8 354 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 SPATS2LQ9NUQ6 558 aaKnown RBP12.55□□□□□ -0.4
TRIM2-209ENST00000494872 ZNRF3Q9ULT6 936 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 SHOC2Q9UQ13 582 aa12.55□□□□□ -0.4
TRIM2-209ENST00000494872 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.55□□□□□ -0.4
TRIM2-209ENST00000494872 CCNE2O96020 404 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 TROVE2P10155 538 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRIM2-209ENST00000494872 PECAM1P16284 738 aaPredicted RBP12.54□□□□□ -0.4
TRIM2-209ENST00000494872 MARK3P27448 753 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 CDC25CP30307 473 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 SLC1A5Q15758 541 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 ARHGEF16Q5VV41 709 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 XRRA1Q6P2D8 792 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 CENPUQ71F23 418 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 NLRP9Q7RTR0 991 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 OTOAQ7RTW8 1153 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 ZNF75CPQ92670 426 aaPredicted RBP12.54□□□□□ -0.4
TRIM2-209ENST00000494872 RMDN3Q96TC7 470 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 FAM118BQ9BPY3 351 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 PDCD2LQ9BRP1 358 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 VPS37BQ9H9H4 285 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 PXMP2Q9NR77 195 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 GINM1Q9NU53 330 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 IP6K2Q9UHH9 426 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 GM2AP17900 193 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 CD58P19256 250 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 EPHB2P29323 1055 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 ARSEP51690 589 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 NOMO3P69849 1222 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
TRIM2-209ENST00000494872 TAF1BQ53T94 588 aaPredicted RBP12.54□□□□□ -0.4
TRIM2-209ENST00000494872 EFHC2Q5JST6 749 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 ANO7Q6IWH7 933 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 SLC39A4Q6P5W5 647 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 ZNF449Q6P9G9 518 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 DHX37Q8IY37 1157 aaKnown RBP12.54□□□□□ -0.4
TRIM2-209ENST00000494872 C4orf33Q8N1A6 199 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 ZNF483Q8TF39 744 aaPredicted RBP12.54□□□□□ -0.4
TRIM2-209ENST00000494872 SENP7Q9BQF6 1050 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 PI4K2AQ9BTU6 479 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 ANKFY1Q9P2R3 1169 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 DNPEPQ9ULA0 475 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 ZNF148Q9UQR1 794 aa12.54□□□□□ -0.4
TRIM2-209ENST00000494872 WNT10BO00744 389 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 TLR3O15455 904 aaKnown RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 CALCAP01258 141 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 LINGO3P0C6S8 592 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 PTPN7P35236 360 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 PCK1P35558 622 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 PTDSS1P48651 473 aaKnown RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 GEMIN4P57678 1058 aaKnown RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 CLDN10P78369 228 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 LBRQ14739 615 aaKnown RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 SGSM1Q2NKQ1 1148 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 TBC1D10BQ4KMP7 808 aaPredicted RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 BRDTQ58F21 947 aaPredicted RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 RNASEH2BQ5TBB1 312 aaKnown RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 LRRC38Q5VT99 294 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 DAB2IPQ5VWQ8 1189 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 LVRNQ6Q4G3 990 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 ANO5Q75V66 913 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 TRMT1LQ7Z2T5 733 aaKnown RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 PCGF5Q86SE9 256 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 PHLDB2Q86SQ0 1253 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 NIM1KQ8IY84 436 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 ABRAQ8N0Z2 381 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 RBBP8NLQ8NC74 664 aaPredicted RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 FEZF2Q8TBJ5 459 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 SLITRK1Q96PX8 696 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 C11orf70Q9BRQ4 267 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 FAM167BQ9BTA0 163 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 FHDC1Q9C0D6 1143 aaPredicted RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 KIF9Q9HAQ2 790 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 PARVAQ9NVD7 372 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 ZMYND8Q9ULU4 1186 aaPredicted RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 TESPA1A2RU30 521 aaPredicted RBP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 TM9SF1O15321 606 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 DKC1O60832 514 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRIM2-209ENST00000494872 CBX6O95503 412 aa12.53□□□□□ -0.4
TRIM2-209ENST00000494872 ATP4AP20648 1035 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms