RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 FRMD4BQ9Y2L6 1034 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 SNX9Q9Y5X1 595 aa18.98■□□□□ 0.63
HDAC4-211ENST00000494800 SMC2O95347 1197 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 ANP32AP39687 249 aaKnown RBP18.97■□□□□ 0.63
HDAC4-211ENST00000494800 TUFMP49411 452 aaKnown RBP18.97■□□□□ 0.63
HDAC4-211ENST00000494800 AP3M2P53677 418 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 MYL7Q01449 175 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 DUSP4Q13115 394 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 SLC39A12Q504Y0 691 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 TRAPPC11Q7Z392 1133 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 BMP8AQ7Z5Y6 402 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 SLC9A9Q8IVB4 645 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 SUGP1Q8IWZ8 645 aaKnown RBP18.97■□□□□ 0.63
HDAC4-211ENST00000494800 TOP6BLQ8N6T0 577 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 OR5B17Q8NGF7 314 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 OR10T2Q8NGX3 314 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 TMEM174Q8WUU8 243 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 FGF13Q92913 245 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 ZCWPW1Q9H0M4 648 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 ASAH2Q9NR71 780 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 SIX4Q9UIU6 781 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 YIPF1Q9Y548 306 aa18.97■□□□□ 0.63
HDAC4-211ENST00000494800 MTMR11A4FU01 709 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 PHACTR2O75167 634 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 NR3C1P04150 777 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 LHX1P48742 406 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 TRPC3Q13507 836 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 CENPPQ6IPU0 288 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 HFE2Q6ZVN8 426 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 DPH6Q7L8W6 267 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 PDCL2Q8N4E4 241 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 CXorf38Q8TB03 319 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 SPPL2BQ8TCT7 592 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 GTPBP4Q9BZE4 634 aaKnown RBP18.96■□□□□ 0.63
HDAC4-211ENST00000494800 KCTD10Q9H3F6 313 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 GDE1Q9NZC3 331 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 ASB3Q9Y575 518 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 PTPRJQ12913 1337 aa18.96■□□□□ 0.63
HDAC4-211ENST00000494800 MICAL2O94851 1124 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 CLSTN1O94985 981 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 RPL13P26373 211 aaKnown RBP18.95■□□□□ 0.62
HDAC4-211ENST00000494800 PCSK1P29120 753 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 VEPH1Q14D04 833 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 NFE2Q16621 373 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-211ENST00000494800 ITIH5Q86UX2 942 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 ADGRF2Q8IZF7 708 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 GUF1Q8N442 669 aaKnown RBP18.95■□□□□ 0.62
HDAC4-211ENST00000494800 ATAD1Q8NBU5 361 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 ITFG1Q8TB96 612 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 TIGD1Q96MW7 591 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 TMEM209Q96SK2 561 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 SEPT5Q99719 369 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-211ENST00000494800 ACBD6Q9BR61 282 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 DDX43Q9NXZ2 648 aaKnown RBP18.95■□□□□ 0.62
HDAC4-211ENST00000494800 FBXL21Q9UKT6 434 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 L1RE1Q9UN81 338 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 DUSP12Q9UNI6 340 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 TRAF3IP3Q9Y228 551 aa18.95■□□□□ 0.62
HDAC4-211ENST00000494800 TCHHQ07283 1943 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 ANHXE9PGG2 379 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 BIRC3Q13489 604 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 PNOCQ13519 176 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 SNW1Q13573 536 aaKnown RBP18.94■□□□□ 0.62
HDAC4-211ENST00000494800 MGAT5BQ3V5L5 792 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 NPAS3Q8IXF0 933 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 FAM200AQ8TCP9 573 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 ING5Q8WYH8 240 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 ASIC4Q96FT7 647 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 FAM84AQ96KN4 292 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 GSDMAQ96QA5 445 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 MMS19Q96T76 1030 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 RTP3Q9BQQ7 232 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 MFSD1Q9H3U5 465 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 DMAC2Q9NW81 257 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 CEP72Q9P209 647 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 SLC27A5Q9Y2P5 690 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 PCDHB5Q9Y5E4 795 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 NUMBLQ9Y6R0 609 aa18.94■□□□□ 0.62
HDAC4-211ENST00000494800 KINO60870 393 aaKnown RBP18.93■□□□□ 0.62
HDAC4-211ENST00000494800 FGF19O95750 216 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 MYL4P12829 197 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 NR2F2P24468 414 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 ATICP31939 592 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 TNNC1P63316 161 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 HTR4Q13639 388 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 TAF12Q16514 161 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 SLC44A3Q8N4M1 653 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 FBXL6Q8N531 539 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 ENGASEQ8NFI3 743 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 RSAD2Q8WXG1 361 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 SMARCE1Q969G3 411 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 SYAP1Q96A49 352 aaPredicted RBP18.93■□□□□ 0.62
HDAC4-211ENST00000494800 ABI2Q9NYB9 513 aaPredicted RBP18.93■□□□□ 0.62
HDAC4-211ENST00000494800 MAPK8IP1Q9UQF2 711 aa18.93■□□□□ 0.62
HDAC4-211ENST00000494800 VNN2O95498 520 aa18.92■□□□□ 0.62
HDAC4-211ENST00000494800 SRFP11831 508 aa18.92■□□□□ 0.62
HDAC4-211ENST00000494800 NFIL3Q16649 462 aa18.92■□□□□ 0.62
HDAC4-211ENST00000494800 SLC5A9Q2M3M2 681 aa18.92■□□□□ 0.62
HDAC4-211ENST00000494800 SOWAHAQ2M3V2 549 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms