RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 MOSPD3O75425 235 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 MYL4P12829 197 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 PNPLA4P41247 253 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 EPHB3P54753 998 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 EPHA5P54756 1037 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 SLC39A12Q504Y0 691 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 CWF19L1Q69YN2 538 aaKnown RBP16.82■□□□□ 0.28
LIMS2-216ENST00000494613 DNAJB7Q7Z6W7 309 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-216ENST00000494613 ALYREFQ86V81 257 aaKnown RBP16.82■□□□□ 0.28
LIMS2-216ENST00000494613 CBWD2Q8IUF1 395 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 NELFCDQ8IXH7 590 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 LRRC3Q9BY71 257 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 DNAJC25Q9H1X3 360 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 INTS13Q9NVM9 706 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 SIX4Q9UIU6 781 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 YIPF1Q9Y548 306 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 SCN1AP35498 2009 aa16.82■□□□□ 0.28
LIMS2-216ENST00000494613 MYH15Q9Y2K3 1946 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 H0Y858 1186 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 ACTN4O43707 911 aaKnown RBP16.81■□□□□ 0.28
LIMS2-216ENST00000494613 KLRC4O43908 158 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 ECI2O75521 394 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 SOAT2O75908 522 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 KRT19P08727 400 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 GJA1P17302 382 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 AOC1P19801 751 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 TUFMP49411 452 aaKnown RBP16.81■□□□□ 0.28
LIMS2-216ENST00000494613 SNRPFP62306 86 aaKnown RBP16.81■□□□□ 0.28
LIMS2-216ENST00000494613 KRT85P78386 507 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 SURF1Q15526 300 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 DUOXA2Q1HG44 320 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 SLC44A4Q53GD3 710 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 FAM78AQ5JUQ0 283 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 LMBRD2Q68DH5 695 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-216ENST00000494613 TTC9BQ8N6N2 239 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 LEMD2Q8NC56 503 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 OR5B17Q8NGF7 314 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 ZNF560Q96MR9 790 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 PHOX2BQ99453 314 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 AGPAT3Q9NRZ7 376 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 GDAP2Q9NXN4 497 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 HSFX1Q9UBD0 423 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 ITGA11Q9UKX5 1188 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 ASB3Q9Y575 518 aa16.81■□□□□ 0.28
LIMS2-216ENST00000494613 ANK1P16157 1881 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 HUS1O60921 280 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 TMEM191BP0C7N4 346 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 PFKFB1P16118 471 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 PLD1Q13393 1074 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 SNW1Q13573 536 aaKnown RBP16.8■□□□□ 0.28
LIMS2-216ENST00000494613 KNOP1Q1ED39 458 aaKnown RBP16.8■□□□□ 0.28
LIMS2-216ENST00000494613 PHLDB3Q6NSJ2 640 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 PDCL2Q8N4E4 241 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 LRRC52Q8N7C0 313 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 ELSPBP1Q96BH3 223 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 ANKRD36BP1Q96IX9 119 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 MTMR12Q9C0I1 747 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 IRF2BPLQ9H1B7 796 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 ZFP14Q9HCL3 533 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 ASAH2Q9NR71 780 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 USP25Q9UHP3 1055 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 HPSEQ9Y251 543 aa16.8■□□□□ 0.28
LIMS2-216ENST00000494613 PTPRJQ12913 1337 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 CST3P01034 146 aaPredicted RBP16.79■□□□□ 0.28
LIMS2-216ENST00000494613 CYP2J2P51589 502 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 STARD6P59095 220 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 SMARCB1Q12824 385 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 BFSP1Q12934 665 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 STK4Q13043 487 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 PSMD2Q13200 908 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 TEAD2Q15562 447 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 BMT2Q1RMZ1 405 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 DCP1BQ8IZD4 617 aaKnown RBP16.79■□□□□ 0.28
LIMS2-216ENST00000494613 XXYLT1Q8NBI6 393 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 SHKBP1Q8TBC3 707 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 ASB16Q96NS5 453 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 GPR88Q9GZN0 384 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 TBC1D17Q9HA65 648 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 ARHGEF3Q9NR81 526 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 TMLHEQ9NVH6 421 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 L1RE1Q9UN81 338 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 SIT1Q9Y3P8 196 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 R3HCC1Q9Y3T6 440 aaKnown RBP16.79■□□□□ 0.28
LIMS2-216ENST00000494613 ATP6V1DQ9Y5K8 247 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 SNX9Q9Y5X1 595 aa16.79■□□□□ 0.28
LIMS2-216ENST00000494613 TNNC2P02585 160 aa16.78■□□□□ 0.28
LIMS2-216ENST00000494613 FCARP24071 287 aa16.78■□□□□ 0.28
LIMS2-216ENST00000494613 NDUFA8P51970 172 aa16.78■□□□□ 0.28
LIMS2-216ENST00000494613 SNRNP35Q16560 246 aaKnown RBP16.78■□□□□ 0.28
LIMS2-216ENST00000494613 SOWAHAQ2M3V2 549 aa16.78■□□□□ 0.28
LIMS2-216ENST00000494613 MGAT5BQ3V5L5 792 aa16.78■□□□□ 0.28
LIMS2-216ENST00000494613 KMT5BQ4FZB7 885 aa16.78■□□□□ 0.28
LIMS2-216ENST00000494613 HS2ST1Q7LGA3 356 aa16.78■□□□□ 0.28
LIMS2-216ENST00000494613 TRAPPC11Q7Z392 1133 aa16.78■□□□□ 0.28
LIMS2-216ENST00000494613 TMC8Q8IU68 726 aa16.78■□□□□ 0.28
LIMS2-216ENST00000494613 C2orf15Q8WU43 125 aaKnown RBP16.78■□□□□ 0.28
LIMS2-216ENST00000494613 ZNF516Q92618 1163 aa16.78■□□□□ 0.28
LIMS2-216ENST00000494613 ATOH1Q92858 354 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-216ENST00000494613 SMARCD2Q92925 531 aa16.78■□□□□ 0.28
LIMS2-216ENST00000494613 PSMG2Q969U7 264 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms