RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 TYMPP19971 482 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 HOXC13P31276 330 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 LILRA4P59901 499 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 CYP4F8P98187 520 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 DMWDQ09019 674 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 TMEM132DQ14C87 1099 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 SLC39A12Q504Y0 691 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 GPR158Q5T848 1215 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 SPATA1Q5VX52 437 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 C9orf57Q5W0N0 161 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 ARMCX5Q6P1M9 558 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 TXNDC11Q6PKC3 985 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 PRR23BQ6ZRT6 265 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 Q6ZS52 159 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 GAREM2Q75VX8 874 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 DNAJB7Q7Z6W7 309 aaPredicted RBP13.7□□□□□ -0.22
SKA1-205ENST00000494518 ARID3BQ8IVW6 561 aaPredicted RBP13.7□□□□□ -0.22
SKA1-205ENST00000494518 RAD54LQ92698 747 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 SECISBP2LQ93073 1101 aaKnown RBP13.7□□□□□ -0.22
SKA1-205ENST00000494518 MKNK1Q9BUB5 465 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 SMG9Q9H0W8 520 aaKnown RBP13.7□□□□□ -0.22
SKA1-205ENST00000494518 TRPV4Q9HBA0 871 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 PARD6AQ9NPB6 346 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 DLL3Q9NYJ7 618 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 CPSF3Q9UKF6 684 aaKnown RBP13.7□□□□□ -0.22
SKA1-205ENST00000494518 SMC3Q9UQE7 1217 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 CHD8Q9HCK8 2581 aa13.7□□□□□ -0.22
SKA1-205ENST00000494518 DPYSL4O14531 572 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 PRAMEF12O95522 483 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 PIGRP01833 764 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 CCR3P51677 355 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 ZNF131P52739 623 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 SRSF5Q13243 272 aaKnown RBP13.69□□□□□ -0.22
SKA1-205ENST00000494518 MYBPC2Q14324 1141 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 MGAT5BQ3V5L5 792 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 WDR44Q5JSH3 913 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 HEATR6Q6AI08 1181 aaKnown RBP13.69□□□□□ -0.22
SKA1-205ENST00000494518 ADALQ6DHV7 355 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 KCTD17Q8N5Z5 321 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 STKLD1Q8NE28 680 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 GIPC2Q8TF65 315 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 AK8Q96MA6 479 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 FIZ1Q96SL8 496 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 PYM1Q9BRP8 204 aaKnown RBP13.69□□□□□ -0.22
SKA1-205ENST00000494518 TRPV5Q9NQA5 729 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 C2orf42Q9NWW7 574 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 GTSE1Q9NYZ3 720 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 GMEB2Q9UKD1 530 aa13.69□□□□□ -0.22
SKA1-205ENST00000494518 MAP1BP46821 2468 aaKnown RBP13.68□□□□□ -0.22
SKA1-205ENST00000494518 CHURC1-FNTBB4DL54 471 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 ATF6P18850 670 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 CXCL12P48061 93 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 FNTBP49356 437 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 TNK2Q07912 1038 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 SPEM2Q0P670 501 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 PON2Q15165 354 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 KYAT1Q16773 422 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 LARP1BQ659C4 914 aaKnown RBP13.68□□□□□ -0.22
SKA1-205ENST00000494518 DYMQ7RTS9 669 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 PSMG2Q969U7 264 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 FAM84AQ96KN4 292 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 OXCT2Q9BYC2 517 aaPredicted RBP13.68□□□□□ -0.22
SKA1-205ENST00000494518 GPR88Q9GZN0 384 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 RAB23Q9ULC3 237 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 EML5Q05BV3 1969 aa13.68□□□□□ -0.22
SKA1-205ENST00000494518 ANAPC1Q9H1A4 1944 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 SPECC1L-ADORA2AF8WAN1 911 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 PIRO00625 290 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 CYB561D2O14569 222 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 CHADO15335 359 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 ADRB2P07550 413 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 TGM1P22735 817 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 CTHP32929 405 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 ATXN1P54253 815 aaKnown RBP13.67□□□□□ -0.22
SKA1-205ENST00000494518 FCHO2Q0JRZ9 810 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 PPP2R5DQ14738 602 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 SF3A1Q15459 793 aaKnown RBP13.67□□□□□ -0.22
SKA1-205ENST00000494518 ARHGAP15Q53QZ3 475 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 WSCD1Q658N2 575 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 USP49Q70CQ1 688 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 ITIH5Q86UX2 942 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 SFR1Q86XK3 245 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 EFCAB13Q8IY85 973 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 LARP4BQ92615 738 aaKnown RBP13.67□□□□□ -0.22
SKA1-205ENST00000494518 E2F7Q96AV8 911 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 EPSTI1Q96J88 318 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 FAM126AQ9BYI3 521 aaPredicted RBP13.67□□□□□ -0.22
SKA1-205ENST00000494518 ZCWPW1Q9H0M4 648 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 DPP3Q9NY33 737 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 ABI2Q9NYB9 513 aaPredicted RBP13.67□□□□□ -0.22
SKA1-205ENST00000494518 TBC1D7Q9P0N9 293 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 AGO2Q9UKV8 859 aaKnown RBP13.67□□□□□ -0.22
SKA1-205ENST00000494518 CDV3Q9UKY7 258 aaKnown RBP13.67□□□□□ -0.22
SKA1-205ENST00000494518 ASB3Q9Y575 518 aa13.67□□□□□ -0.22
SKA1-205ENST00000494518 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.67□□□□□ -0.22
SKA1-205ENST00000494518 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.67□□□□□ -0.22
SKA1-205ENST00000494518 MYO16Q9Y6X6 1858 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 ANO9A1A5B4 782 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 DCDC2BA2VCK2 349 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 VPS37CA5D8V6 355 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms