RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 SPATA18Q8TC71 538 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 PPP2R3CQ969Q6 453 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 MRPL45Q9BRJ2 306 aaKnown RBP15.58■□□□□ 0.09
BRCA1-223ENST00000494123 LSM14BQ9BX40 385 aaKnown RBP15.58■□□□□ 0.09
BRCA1-223ENST00000494123 BCO2Q9BYV7 579 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 LMCD1Q9NZU5 365 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 PCDHGC5Q9Y5F6 944 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 IRAK3Q9Y616 596 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 C2orf71A6NGG8 1288 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 HIDE1A8MVS5 230 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 WEE2P0C1S8 567 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 FAM163BP0C2L3 166 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 CD58P19256 250 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 WARSP23381 471 aaKnown RBP15.57■□□□□ 0.08
BRCA1-223ENST00000494123 CDH8P55286 799 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 YWHAEP62258 255 aaKnown RBP15.57■□□□□ 0.08
BRCA1-223ENST00000494123 CUL2Q13617 745 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 SYCP1Q15431 976 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 GLYCTKQ8IVS8 523 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 KBTBD7Q8WVZ9 684 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 NAP1L5Q96NT1 182 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-223ENST00000494123 OXCT2Q9BYC2 517 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-223ENST00000494123 CYP3A43Q9HB55 503 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 UBE2TQ9NPD8 197 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-223ENST00000494123 DDX43Q9NXZ2 648 aaKnown RBP15.57■□□□□ 0.08
BRCA1-223ENST00000494123 IFNKQ9P0W0 207 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 MTRRQ9UBK8 725 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 APEX2Q9UBZ4 518 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 BACE2Q9Y5Z0 518 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 ATG2AQ2TAZ0 1938 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 CBFA2T2O43439 604 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 RPL17P18621 184 aaKnown RBP15.57■□□□□ 0.08
BRCA1-223ENST00000494123 GNL1P36915 607 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-223ENST00000494123 NDUFV1P49821 464 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 ARPP19P56211 112 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 KCNMA1Q12791 1236 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 MRPL58Q14197 206 aaKnown RBP15.57■□□□□ 0.08
BRCA1-223ENST00000494123 RRAGAQ7L523 313 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 LIMS2Q7Z4I7 341 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 ARHGEF19Q8IW93 802 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 TTC39CQ8N584 583 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 FAM81BQ96LP2 452 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 ARID3AQ99856 593 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 FBXL5Q9UKA1 691 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 CDY1Q9Y6F8 540 aa15.57■□□□□ 0.08
BRCA1-223ENST00000494123 TRANK1O15050 2925 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 OR6C75A6NL08 312 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 A8MXQ7 604 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 TEX33O43247 280 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 LILRB3O75022 631 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 ADH1AP07327 375 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 CNPP09543 421 aaKnown RBP15.56■□□□□ 0.08
BRCA1-223ENST00000494123 CPB1P15086 417 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 TRIM21P19474 475 aaKnown RBP15.56■□□□□ 0.08
BRCA1-223ENST00000494123 PCSK1P29120 753 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 MFAP3P55082 362 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 TSPY1Q01534 308 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 GCNT1Q02742 428 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 NR1I3Q14994 352 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 PHLDB3Q6NSJ2 640 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 OSTM1Q86WC4 334 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 KLHL5Q96PQ7 755 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 ERGIC2Q96RQ1 377 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 DNAI2Q9GZS0 605 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 SDCBP2Q9H190 292 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 NSUN3Q9H649 340 aaKnown RBP15.56■□□□□ 0.08
BRCA1-223ENST00000494123 RXFP1Q9HBX9 757 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 FAM207AQ9NSI2 230 aaPredicted RBP15.56■□□□□ 0.08
BRCA1-223ENST00000494123 FNIP2Q9P278 1114 aa15.56■□□□□ 0.08
BRCA1-223ENST00000494123 GABRDO14764 452 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 TEX28O15482 410 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 PDGFRBP09619 1106 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 ACAT1P24752 427 aaKnown RBP15.55■□□□□ 0.08
BRCA1-223ENST00000494123 KLRC2P26717 231 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 OR1D2P34982 312 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 KLK7P49862 253 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 APBA1Q02410 837 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 ADGRE1Q14246 886 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 ENOSF1Q7L5Y1 443 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 RBM23Q86U06 439 aaKnown RBP15.55■□□□□ 0.08
BRCA1-223ENST00000494123 MICALL1Q8N3F8 863 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 NEK11Q8NG66 645 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 MYLIPQ8WY64 445 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 CDX2Q99626 313 aaPredicted RBP15.55■□□□□ 0.08
BRCA1-223ENST00000494123 CLSTN3Q9BQT9 956 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 ACBD6Q9BR61 282 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 XPO4Q9C0E2 1151 aaKnown RBP15.55■□□□□ 0.08
BRCA1-223ENST00000494123 FAM124BQ9H5Z6 455 aaPredicted RBP15.55■□□□□ 0.08
BRCA1-223ENST00000494123 TLE6Q9H808 572 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 SIX2Q9NPC8 291 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 PLCB1Q9NQ66 1216 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 CISHQ9NSE2 258 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 BARX2Q9UMQ3 279 aaPredicted RBP15.55■□□□□ 0.08
BRCA1-223ENST00000494123 STXBP5LQ9Y2K9 1186 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 MTCH2Q9Y6C9 303 aa15.55■□□□□ 0.08
BRCA1-223ENST00000494123 RFX1P22670 979 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 LMO2P25791 158 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 ARHGAP44Q17R89 818 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 UVSSAQ2YD98 709 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 KLHDC7AQ5VTJ3 777 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms