RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 DNALI1O14645 258 aaPredicted RBP12.15□□□□□ -0.46
RFC4-214ENST00000494047 MAGEB2O15479 319 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 CAPN15O75808 1086 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 HLA-DRAP01903 254 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 ITGAVP06756 1048 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 KRT7P08729 469 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 CLTAP09496 248 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 WEE2P0C1S8 567 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 MYCLP12524 364 aaPredicted RBP12.15□□□□□ -0.46
RFC4-214ENST00000494047 BRAFP15056 766 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 IVDP26440 423 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 ATP11AP98196 1134 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 CRHR2Q13324 411 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 ZNF268Q14587 947 aaPredicted RBP12.15□□□□□ -0.46
RFC4-214ENST00000494047 MTFR1Q15390 333 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 KLHL38Q2WGJ6 581 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 IZUMO3Q5VZ72 239 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 HIBCHQ6NVY1 386 aaPredicted RBP12.15□□□□□ -0.46
RFC4-214ENST00000494047 GSTA5Q7RTV2 222 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 DNAAF5Q86Y56 855 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 WDR49Q8IV35 697 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 TMEM35BQ8NCS4 154 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 IL31RAQ8NI17 732 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 FEZF2Q8TBJ5 459 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 NKD2Q969F2 451 aaPredicted RBP12.15□□□□□ -0.46
RFC4-214ENST00000494047 SAAL1Q96ER3 474 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 ABHD8Q96I13 439 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 TAAR1Q96RJ0 339 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 TEX13BQ9BXU2 312 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 MCOLN1Q9GZU1 580 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 POLR3FQ9H1D9 316 aaPredicted RBP12.15□□□□□ -0.46
RFC4-214ENST00000494047 PORCNQ9H237 461 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 ACAD9Q9H845 621 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 RBAKQ9NYW8 714 aaPredicted RBP12.15□□□□□ -0.46
RFC4-214ENST00000494047 GABBR1Q9UBS5 961 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 FBXO40Q9UH90 709 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 SEPT9Q9UHD8 586 aaPredicted RBP12.15□□□□□ -0.46
RFC4-214ENST00000494047 SLC45A1Q9Y2W3 748 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 AFG3L2Q9Y4W6 797 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 A0A0G2JLL6 359 aaPredicted RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 BTBD19C9JJ37 291 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 ANKRD63C9JTQ0 380 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 DNM1LO00429 736 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 TLR3O15455 904 aaKnown RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 MED7O43513 233 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 KIF1CO43896 1103 aaKnown RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 ZNF189O75820 626 aaPredicted RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 ACSL3O95573 720 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 CCNE2O96020 404 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 C4BPAP04003 597 aaKnown RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 SUPT20HL2P0C7V6 817 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 KCNA2P16389 499 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 DESP17661 470 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 EIF4BP23588 611 aaKnown RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 RRM1P23921 792 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 CCND1P24385 295 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 CDH5P33151 784 aaPredicted RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 SLC8A3P57103 927 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 IRX3P78415 501 aaPredicted RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 PRKCEQ02156 737 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 SP3Q02447 781 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 NFX1Q12986 1120 aaKnown RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 EMC2Q15006 297 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 ZYXQ15942 572 aaKnown RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 HADHQ16836 314 aaKnown RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 NUGGCQ68CJ6 796 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 PRRT2Q7Z6L0 340 aaPredicted RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 CHST13Q8NET6 341 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 MDM1Q8TC05 714 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 SH3TC2Q8TF17 1288 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 TCP11Q8WWU5 503 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 KAT5Q92993 513 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 SMC6Q96SB8 1091 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 ELAC2Q9BQ52 826 aaKnown RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 FAM213AQ9BRX8 229 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 C2orf40Q9H1Z8 148 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 RAVER2Q9HCJ3 691 aaKnown RBP12.14□□□□□ -0.47
RFC4-214ENST00000494047 NINJ2Q9NZG7 142 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 PCDHGC3Q9UN70 934 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 NEU2Q9Y3R4 380 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 UMODL1Q5DID0 1318 aa12.14□□□□□ -0.47
RFC4-214ENST00000494047 PTPRFP10586 1907 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 KIAA1217Q5T5P2 1943 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 EXOC1LA0A1B0GW35 172 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 GOLGA8IPA6NC78 632 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 GOLGA8JA6NMD2 632 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 K7ERI5 159 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 ZWINTO95229 277 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 LUC7L3O95232 432 aaKnown RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 OATP04181 439 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 ATP5BP06576 529 aaKnown RBP12.13□□□□□ -0.47
RFC4-214ENST00000494047 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 RALAP11233 206 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 ALADP13716 330 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 CCNB1P14635 433 aa12.13□□□□□ -0.47
RFC4-214ENST00000494047 MMP8P22894 467 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms