RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 FAM153AQ9UHL3 310 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 DERAQ9Y315 318 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 TCRBV7S2A1N4TA0A589 114 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 C17orf102A2RUQ5 167 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 FAM187AA6NFU0 413 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 O00370 1275 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 PPEF2O14830 753 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 RECQL4O94761 1208 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 CD19P15391 556 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 CDH8P55286 799 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 INHBEP58166 350 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 TAS2R40P59535 323 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 LACTBP83111 547 aaPredicted RBP11.31□□□□□ -0.6
CLCN6-208ENST00000494028 ZNF200P98182 395 aaPredicted RBP11.31□□□□□ -0.6
CLCN6-208ENST00000494028 PTPN11Q06124 597 aaPredicted RBP11.31□□□□□ -0.6
CLCN6-208ENST00000494028 ORC1Q13415 861 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 CUL1Q13616 776 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 DHX34Q14147 1143 aaKnown RBP11.31□□□□□ -0.6
CLCN6-208ENST00000494028 PCBP1Q15365 356 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLCN6-208ENST00000494028 TRADDQ15628 312 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 FSCN1Q16658 493 aaKnown RBP11.31□□□□□ -0.6
CLCN6-208ENST00000494028 UBXN11Q5T124 520 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 DAB2IPQ5VWQ8 1189 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 DNAJC24Q6P3W2 148 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 TTC27Q6P3X3 843 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 NOTUMQ6P988 496 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 ADAT2Q7Z6V5 191 aaKnown RBP11.31□□□□□ -0.6
CLCN6-208ENST00000494028 WDTC1Q8N5D0 677 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 FAM71BQ8TC56 605 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 DNAJB3Q8WWF6 145 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 TRIB2Q92519 343 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 HPDLQ96IR7 371 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 ZIC5Q96T25 663 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 HERPUD2Q9BSE4 406 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 ZNF518BQ9C0D4 1074 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 ARHGAP39Q9C0H5 1083 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 UPF3AQ9H1J1 476 aaKnown RBP11.31□□□□□ -0.6
CLCN6-208ENST00000494028 MRPL47Q9HD33 250 aaKnown RBP11.31□□□□□ -0.6
CLCN6-208ENST00000494028 MED4Q9NPJ6 270 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 PRDM10Q9NQV6 1147 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 CREBZFQ9NS37 354 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 DPP3Q9NY33 737 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 SNTG2Q9NY99 539 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 CNTN3Q9P232 1028 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 CYTH4Q9UIA0 394 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLCN6-208ENST00000494028 AGAP1Q9UPQ3 857 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 GINS2Q9Y248 185 aa11.31□□□□□ -0.6
CLCN6-208ENST00000494028 AGPSO00116 658 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 TLR3O15455 904 aaKnown RBP11.3□□□□□ -0.6
CLCN6-208ENST00000494028 MED7O43513 233 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 CA12O43570 354 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 MICAL2O94851 1124 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 P4HA1P13674 534 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 CYP3A5P20815 502 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 EIF4BP23588 611 aaKnown RBP11.3□□□□□ -0.6
CLCN6-208ENST00000494028 AXLP30530 894 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 CHRNA3P32297 505 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 HSPA9P38646 679 aaKnown RBP11.3□□□□□ -0.6
CLCN6-208ENST00000494028 PTGIRP43119 386 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 FCGRTP55899 365 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 C1QTNF8P60827 252 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 RBP5P82980 135 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 CDC42EP1Q00587 391 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 DR1Q01658 176 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 OGDHQ02218 1023 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 GPS2Q13227 327 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 WDR72Q3MJ13 1102 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 JAMLQ86YT9 394 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 C3orf20Q8ND61 904 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 CCDC26Q8TAB7 109 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.3□□□□□ -0.6
CLCN6-208ENST00000494028 FEZF2Q8TBJ5 459 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 C18orf8Q96DM3 657 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 ZMAT2Q96NC0 199 aaKnown RBP11.3□□□□□ -0.6
CLCN6-208ENST00000494028 MCEEQ96PE7 176 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 RAB17Q9H0T7 212 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 FAM124BQ9H5Z6 455 aaPredicted RBP11.3□□□□□ -0.6
CLCN6-208ENST00000494028 PLEKHA5Q9HAU0 1116 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 PARVAQ9NVD7 372 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 TJP2Q9UDY2 1190 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 PIN4Q9Y237 131 aaKnown RBP11.3□□□□□ -0.6
CLCN6-208ENST00000494028 CEP83Q9Y592 693 aa11.3□□□□□ -0.6
CLCN6-208ENST00000494028 TMEM191CA6NGB0 347 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 MYO1FO00160 1098 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 POLR3GO15318 223 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-208ENST00000494028 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
CLCN6-208ENST00000494028 SYF2O95926 243 aaKnown RBP11.29□□□□□ -0.6
CLCN6-208ENST00000494028 RARAP10276 462 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 TM4SF4P48230 202 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 FNTAP49354 379 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 GJA9P57773 515 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 RPL7AP62424 266 aaKnown RBP11.29□□□□□ -0.6
CLCN6-208ENST00000494028 TAP1Q03518 808 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 HLTFQ14527 1009 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLCN6-208ENST00000494028 ZBTB6Q15916 424 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 KCTD19Q17RG1 926 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-208ENST00000494028 GLRA4Q5JXX5 417 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 CYP4A22Q5TCH4 519 aa11.29□□□□□ -0.6
CLCN6-208ENST00000494028 MAATS1Q7Z4T9 603 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms