RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 FAM186BQ8IYM0 893 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 GPATCH11Q8N954 259 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 MSANTD4Q8NCY6 345 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 ZSWIM2Q8NEG5 633 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 RDM1Q8NG50 284 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 OLIG1Q8TAK6 271 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 LMO3Q8TAP4 145 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 NSUN6Q8TEA1 469 aaKnown RBP6.52□□□□□ -1.37
CPSF7-213ENST00000494016 GOLGA1Q92805 767 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 ELMO3Q96BJ8 720 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 PLPPR2Q96GM1 343 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 CAPNS2Q96L46 248 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 INPP4AQ96PE3 977 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-213ENST00000494016 ACCSQ96QU6 501 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 MMS19Q96T76 1030 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 SH2D3AQ9BRG2 576 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 TIPINQ9BVW5 301 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 IFIH1Q9BYX4 1025 aaKnown RBP6.52□□□□□ -1.37
CPSF7-213ENST00000494016 TSGA10Q9BZW7 698 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 GBP3Q9H0R5 595 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 A1CFQ9NQ94 594 aaKnown RBP6.52□□□□□ -1.37
CPSF7-213ENST00000494016 TMOD4Q9NZQ9 345 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 GGT7Q9UJ14 662 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 FBXL5Q9UKA1 691 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 RAB21Q9UL25 225 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 NENFQ9UMX5 172 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 FHOD1Q9Y613 1164 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 SAR1BQ9Y6B6 198 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 PAPPA2Q9BXP8 1791 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 NFASCO94856 1347 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 ANO9A1A5B4 782 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 WDR64B1ANS9 1081 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 TISP43B9A030 160 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 ANKRD63C9JTQ0 380 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 GFRA2O00451 464 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 ZNF185O15231 689 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 SLC16A4O15374 487 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 PEX10O60683 326 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 RNGTTO60942 597 aaKnown RBP6.51□□□□□ -1.37
CPSF7-213ENST00000494016 TACC1O75410 805 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 SEC31AO94979 1220 aaKnown RBP6.51□□□□□ -1.37
CPSF7-213ENST00000494016 GARTP22102 1010 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 FMO5P49326 533 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 CYP2J2P51589 502 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 JAK3P52333 1124 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 NCKAP1LP55160 1127 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 TUBB4BP68371 445 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 CBX1P83916 185 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 RPL6Q02878 288 aaKnown RBP6.51□□□□□ -1.37
CPSF7-213ENST00000494016 KLHL30Q0D2K2 578 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 VGLL4Q14135 290 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 PLS1Q14651 629 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 NAB2Q15742 525 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 SLC18A3Q16572 532 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 XKR9Q5GH70 373 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 WIPI1Q5MNZ9 446 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-213ENST00000494016 TREML2Q5T2D2 321 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 ZBTB37Q5TC79 503 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 CYP4F22Q6NT55 531 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 SWSAP1Q6NVH7 229 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 ABHD15Q6UXT9 468 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 STXBP4Q6ZWJ1 553 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 ZNF571Q7Z3V5 609 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-213ENST00000494016 HAUS6Q7Z4H7 955 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 NLRX1Q86UT6 975 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 SYCP3Q8IZU3 236 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 RNF10Q8N5U6 811 aaKnown RBP6.51□□□□□ -1.37
CPSF7-213ENST00000494016 ANKRD13CQ8N6S4 541 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 FAM133AQ8N9E0 248 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 NOA1Q8NC60 698 aaKnown RBP6.51□□□□□ -1.37
CPSF7-213ENST00000494016 GOLGA5Q8TBA6 731 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 PLEKHO2Q8TD55 490 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 GATA6Q92908 595 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 SECISBP2LQ93073 1101 aaKnown RBP6.51□□□□□ -1.37
CPSF7-213ENST00000494016 ISL2Q96A47 359 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 PNKPQ96T60 521 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 NTPCRQ9BSD7 190 aaKnown RBP6.51□□□□□ -1.37
CPSF7-213ENST00000494016 R3HDMLQ9H3Y0 253 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 PCIF1Q9H4Z3 704 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 ACAD9Q9H845 621 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 ZNF408Q9H9D4 720 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 GPRC5CQ9NQ84 441 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 C1GALT1Q9NS00 363 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 BTBD7Q9P203 1132 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 LARSQ9P2J5 1176 aaKnown RBP6.51□□□□□ -1.37
CPSF7-213ENST00000494016 GABBR1Q9UBS5 961 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 ADAMTS1Q9UHI8 967 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 PCOLCE2Q9UKZ9 415 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 PCDHA10Q9Y5I2 948 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 LOC285556D6RIA3 1793 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 OTOFQ9HC10 1997 aa6.51□□□□□ -1.37
CPSF7-213ENST00000494016 PTPRFP10586 1907 aa6.5□□□□□ -1.37
CPSF7-213ENST00000494016 MACROD2A1Z1Q3 448 aa6.5□□□□□ -1.37
CPSF7-213ENST00000494016 FAM221AA4D161 298 aa6.5□□□□□ -1.37
CPSF7-213ENST00000494016 CTAGE15A4D2H0 777 aa6.5□□□□□ -1.37
CPSF7-213ENST00000494016 BTNL10A8MVZ5 291 aa6.5□□□□□ -1.37
CPSF7-213ENST00000494016 MAPK13O15264 365 aa6.5□□□□□ -1.37
CPSF7-213ENST00000494016 ATP8B1O43520 1251 aa6.5□□□□□ -1.37
CPSF7-213ENST00000494016 CREB3O43889 395 aa6.5□□□□□ -1.37
CPSF7-213ENST00000494016 EXOC3O60645 756 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms