RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 MYO1CO00159 1063 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 TNFRSF6BO95407 300 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 GJB1P08034 283 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 NPPBP16860 134 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 EGR1P18146 543 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 BTF3P20290 206 aaKnown RBP5.11□□□□□ -1.59
GTF3A-208ENST00000493903 FPR1P21462 350 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 RPS6KB1P23443 525 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 LIFRP42702 1097 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 ETV4P43268 484 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 SLC11A2P49281 568 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 ITGA1P56199 1179 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 PTH1RQ03431 593 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 MAPK7Q13164 816 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 TARBP2Q15633 366 aaKnown RBP5.11□□□□□ -1.59
GTF3A-208ENST00000493903 FAM47AQ5JRC9 791 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 RRAGBQ5VZM2 374 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 OGFOD2Q6N063 350 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 MPZL3Q6UWV2 235 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 KRT77Q7Z794 578 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 CPOQ8IVL8 374 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 DNAJC5GQ8N7S2 189 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 NLGN4YQ8NFZ3 816 aaPredicted RBP5.11□□□□□ -1.59
GTF3A-208ENST00000493903 CFHR4Q92496 578 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 SPSB4Q96A44 273 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 RBM15Q96T37 977 aaKnown RBP eCLIP5.11□□□□□ -1.59
GTF3A-208ENST00000493903 KATNBL1Q9H079 304 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 PLEKHA5Q9HAU0 1116 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 GPR35Q9HC97 309 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 SLAMF7Q9NQ25 335 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 TBC1D23Q9NUY8 699 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 JKAMPQ9P055 326 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 FEM1BQ9UK73 627 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 ATRNL1Q5VV63 1379 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 A0A087WZ62 844 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 A0A087X0M5 115 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 A0A1B0GX30 115 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 ASNA1O43681 348 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 ORC4O43929 436 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 DNAJB5O75953 348 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 TBX18O95935 607 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 GRPP07492 148 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 XRCC6P12956 609 aaKnown RBP eCLIP5.1□□□□□ -1.59
GTF3A-208ENST00000493903 COPB2P35606 906 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 ALDH1A3P47895 512 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 STAT5BP51692 787 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 WNT3P56703 355 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 APBA1Q02410 837 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 UBE3AQ05086 875 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 TOP3AQ13472 1001 aaPredicted RBP5.1□□□□□ -1.59
GTF3A-208ENST00000493903 MLANAQ16655 118 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 CCDC96Q2M329 555 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 AMOTQ4VCS5 1084 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 FAM133BQ5BKY9 247 aaKnown RBP5.1□□□□□ -1.59
GTF3A-208ENST00000493903 PRAMEF14Q5SWL7 426 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 PHF19Q5T6S3 580 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 DCAF12L1Q5VU92 463 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 KIAA0408Q6ZU52 694 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 B3GNT8Q7Z7M8 397 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 IRF2BP1Q8IU81 584 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 CCDC117Q8IWD4 279 aaPredicted RBP5.1□□□□□ -1.59
GTF3A-208ENST00000493903 MPP5Q8N3R9 675 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 SLC15A4Q8N697 577 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 TTLL6Q8N841 843 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 GPATCH11Q8N954 259 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 REPS2Q8NFH8 660 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 ADAMTS18Q8TE60 1221 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 STON2Q8WXE9 905 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 RFFLQ8WZ73 363 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 HTRA1Q92743 480 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 SIK2Q9H0K1 926 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 TP63Q9H3D4 680 aaPredicted RBP5.1□□□□□ -1.59
GTF3A-208ENST00000493903 SEPSECSQ9HD40 501 aaKnown RBP5.1□□□□□ -1.59
GTF3A-208ENST00000493903 IRAK4Q9NWZ3 460 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 ING3Q9NXR8 418 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 MID2Q9UJV3 735 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 CDC42EP3Q9UKI2 254 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 SCAF8Q9UPN6 1271 aaKnown RBP5.1□□□□□ -1.59
GTF3A-208ENST00000493903 MTO1Q9Y2Z2 717 aaKnown RBP5.1□□□□□ -1.59
GTF3A-208ENST00000493903 TMX2Q9Y320 296 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 IRS2Q9Y4H2 1338 aa5.1□□□□□ -1.59
GTF3A-208ENST00000493903 CCP110O43303 1012 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 RASSF9O75901 435 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 ACTL6BO94805 426 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 UNC5CO95185 931 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 CHEK2O96017 543 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 HMGCRP04035 888 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 JUNP05412 331 aaKnown RBP5.09□□□□□ -1.59
GTF3A-208ENST00000493903 CYP2C9P11712 490 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 ACVR2AP27037 513 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 MEOX1P50221 254 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 TUBP50607 506 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 UCP3P55916 312 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 ACTR2P61160 394 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 AP2B1P63010 937 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 SMAD4Q13485 552 aaKnown RBP5.09□□□□□ -1.59
GTF3A-208ENST00000493903 SLC29A2Q14542 456 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 ZNF827Q17R98 1081 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 SLC5A9Q2M3M2 681 aa5.09□□□□□ -1.59
GTF3A-208ENST00000493903 ARHGAP15Q53QZ3 475 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms