RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 SPTLC2O15270 562 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 CYP11A1P05108 521 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 GDI1P31150 447 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 TFAMQ00059 246 aaKnown RBP15.82■□□□□ 0.12
ATG4B-223ENST00000493618 WSCD1Q658N2 575 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 C1orf210Q8IVY1 113 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 FAM200AQ8TCP9 573 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 SMARCD2Q92925 531 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 DHX58Q96C10 678 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 LPIN3Q9BQK8 851 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 CBWD1Q9BRT8 395 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 TRMT61BQ9BVS5 477 aaKnown RBP15.82■□□□□ 0.12
ATG4B-223ENST00000493618 ZCWPW1Q9H0M4 648 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 OLFML3Q9NRN5 406 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 SPATA6Q9NWH7 488 aaPredicted RBP15.82■□□□□ 0.12
ATG4B-223ENST00000493618 RBAKQ9NYW8 714 aaPredicted RBP15.82■□□□□ 0.12
ATG4B-223ENST00000493618 MORC2Q9Y6X9 1032 aaPredicted RBP15.82■□□□□ 0.12
ATG4B-223ENST00000493618 CACNA1IQ9P0X4 2223 aa15.82■□□□□ 0.12
ATG4B-223ENST00000493618 KPNA7A9QM74 516 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 ITGB3P05106 788 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 SP9P0CG40 484 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 TARSP26639 723 aaKnown RBP15.81■□□□□ 0.12
ATG4B-223ENST00000493618 POLR2BP30876 1174 aaKnown RBP15.81■□□□□ 0.12
ATG4B-223ENST00000493618 MGAT5BQ3V5L5 792 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 SV2CQ496J9 727 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 DNAJB7Q7Z6W7 309 aaPredicted RBP15.81■□□□□ 0.12
ATG4B-223ENST00000493618 LRRTM3Q86VH5 581 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 BRSK2Q8IWQ3 736 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 CCDC65Q8IXS2 484 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 LEMD2Q8NC56 503 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 SPRYD3Q8NCJ5 442 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 GIPC2Q8TF65 315 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 RSPRY1Q96DX4 576 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 BORCS6Q96GS4 357 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 ZNF396Q96N95 335 aaPredicted RBP15.81■□□□□ 0.12
ATG4B-223ENST00000493618 BCO2Q9BYV7 579 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 DSEQ9UL01 958 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 AGAP1Q9UPQ3 857 aa15.81■□□□□ 0.12
ATG4B-223ENST00000493618 SHISA7A6NL88 538 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 HEPACAM2A8MVW5 462 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 GARTP22102 1010 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 PAX3P23760 479 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 BFSP1Q12934 665 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 E2F4Q16254 413 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 LMBRD2Q68DH5 695 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-223ENST00000493618 MAML2Q8IZL2 1156 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-223ENST00000493618 ADSSL1Q8N142 457 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 THEM5Q8N1Q8 247 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 KCNG4Q8TDN1 519 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 SNX21Q969T3 373 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 ZNF560Q96MR9 790 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 ATXN3LQ9H3M9 355 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 PDE11AQ9HCR9 933 aa15.8■□□□□ 0.12
ATG4B-223ENST00000493618 NDRG2Q9UN36 371 aaKnown RBP15.8■□□□□ 0.12
ATG4B-223ENST00000493618 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-223ENST00000493618 EXTL3O43909 919 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 PPP6R2O75170 966 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 LDHAP00338 332 aaKnown RBP15.79■□□□□ 0.12
ATG4B-223ENST00000493618 KRT19P08727 400 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 PSMC3P17980 439 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 ATF6P18850 670 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 GABRR2P28476 465 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 ASIC1P78348 528 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 CYP4F8P98187 520 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 POU5F1Q01860 360 aaKnown RBP15.79■□□□□ 0.12
ATG4B-223ENST00000493618 ALCAMQ13740 583 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 GPR158Q5T848 1215 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 SHC4Q6S5L8 630 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 ZNF852Q6ZMS4 543 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 GAREM2Q75VX8 874 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 HSCBQ8IWL3 235 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 CSGALNACT2Q8N6G5 542 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 C1orf127Q8N9H9 656 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 STKLD1Q8NE28 680 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 DNASE1L2Q92874 299 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 PSMG2Q969U7 264 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 TNMDQ9H2S6 317 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 TMLHEQ9NVH6 421 aa15.79■□□□□ 0.12
ATG4B-223ENST00000493618 ABI2Q9NYB9 513 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-223ENST00000493618 GREB1Q4ZG55 1949 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 ZNF263O14978 683 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 CUTAO60888 179 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 HSP90AA1P07900 732 aaKnown RBP15.78■□□□□ 0.12
ATG4B-223ENST00000493618 ACAT1P24752 427 aaKnown RBP15.78■□□□□ 0.12
ATG4B-223ENST00000493618 CASP1P29466 404 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 GPR15P49685 360 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 ITIH5Q86UX2 942 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 NT5DC4Q86YG4 428 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 MFSD6LQ8IWD5 586 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 GPD1LQ8N335 351 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 PDCL2Q8N4E4 241 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 TTC8Q8TAM2 541 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 CACTINQ8WUQ7 758 aaKnown RBP15.78■□□□□ 0.12
ATG4B-223ENST00000493618 IRF7Q92985 503 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 MKNK1Q9BUB5 465 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 OSBPL6Q9BZF3 934 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 MTMR12Q9C0I1 747 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 TMEM206Q9H813 350 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 TRPV4Q9HBA0 871 aa15.78■□□□□ 0.12
ATG4B-223ENST00000493618 KBTBD4Q9NVX7 518 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms