RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 PDLIM1O00151 329 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 IFIT3O14879 490 aaKnown RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 STRNO43815 780 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 PHF2O75151 1096 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 TBX10O75333 385 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 FGF18O76093 207 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 REC8O95072 547 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 FKBP9O95302 570 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 GGPS1O95749 300 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 TPBGLP0DKB5 382 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 ZBTB48P10074 688 aaPredicted RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 CDK4P11802 303 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 CCNA2P20248 432 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 AXLP30530 894 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 BMI1P35226 326 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 PSMC2P35998 433 aaKnown RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 IL15P40933 162 aaPredicted RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 ZNF41P51814 821 aaPredicted RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 SUMO1P63165 101 aaKnown RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 TPM4P67936 248 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 MC1RQ01726 317 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 PLD1Q13393 1074 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 NCF4Q15080 339 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 DLGAP5Q15398 846 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 ZNF827Q17R98 1081 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 Q4G0T1 1027 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 SHEQ5VZ18 495 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 VHLLQ6RSH7 139 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 KIF6Q6ZMV9 814 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 FKBP9P1Q75LS8 142 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 TSPYL5Q86VY4 417 aaPredicted RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 OSTM1Q86WC4 334 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 SLC22A9Q8IVM8 553 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 CCDC105Q8IYK2 499 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 ZNF321PQ8N8H1 164 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 CCDC150Q8NCX0 1101 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 KIF18AQ8NI77 898 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 EXOC6Q8TAG9 804 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 SLC7A14Q8TBB6 771 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 BCL7CQ8WUZ0 217 aaPredicted RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 TMEM40Q8WWA1 233 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 METTL21AQ8WXB1 218 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 EZH1Q92800 747 aaPredicted RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 KAT2BQ92831 832 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 PHKBQ93100 1093 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 ZNF653Q96CK0 615 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 SNF8Q96H20 258 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 ZNF764Q96H86 408 aaPredicted RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 IFT74Q96LB3 600 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 PRICKLE1Q96MT3 831 aaPredicted RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 CDK5RAP1Q96SZ6 601 aaKnown RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 LPIN3Q9BQK8 851 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 LLPHQ9BRT6 129 aaKnown RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 THUMPD3Q9BV44 507 aaKnown RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 B3GNT5Q9BYG0 378 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 ARHGEF4Q9NR80 690 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 TLR7Q9NYK1 1049 aaKnown RBP4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 TSPYL4Q9UJ04 414 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 METRNQ9UJH8 293 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 COMMD3-BMI1R4GMX3 469 aa4.78□□□□□ -1.64
SUPT20H-221ENST00000493537 EME2A4GXA9 379 aaPredicted RBP4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 TRIM43BA6NCK2 446 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 H3BML4 177 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 O00370 1275 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 ACKR2O00590 384 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 LSM1O15116 133 aaKnown RBP4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 HDAC3O15379 428 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 ST8SIA5O15466 376 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 PRODHO43272 600 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 ACSL4O60488 711 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 TACC1O75410 805 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 GJB3O75712 270 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 BCAS2O75934 225 aaPredicted RBP4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 KLHL2O95198 593 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 CAVIN2O95810 425 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 SCGB1D1O95968 90 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 RPLP1P05386 114 aaKnown RBP4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 C6P13671 934 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 HOXB1P14653 301 aaPredicted RBP4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 CES1P23141 567 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 MCM3P25205 808 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 RXRBP28702 533 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 ADSLP30566 484 aaPredicted RBP4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 MAPK4P31152 587 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 TTKP33981 857 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 ARCN1P48444 511 aaKnown RBP4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 ALDH9A1P49189 494 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 DHPSP49366 369 aaPredicted RBP4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 PPP5CP53041 499 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 ALDH18A1P54886 795 aaKnown RBP4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 MYL6P60660 151 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 VAMP2P63027 116 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 STK4Q13043 487 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 ARID5BQ14865 1188 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 SMAD2Q15796 467 aaKnown RBP4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 GRIK5Q16478 980 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 C1orf185Q5T7R7 199 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 MAP3K21Q5TCX8 1036 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 CREB3L3Q68CJ9 461 aa4.77□□□□□ -1.65
SUPT20H-221ENST00000493537 TWF2Q6IBS0 349 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms