RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ZFPL1O95159 310 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 EYA4O95677 639 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 MASP1P48740 699 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 KRTAP10-11P60412 298 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 ATP8B2P98198 1209 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 FOXF2Q12947 444 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 FAM50AQ14320 339 aaKnown RBP4.31□□□□□ -1.72
PTCD3-218ENST00000493430 SF3B3Q15393 1217 aaKnown RBP4.31□□□□□ -1.72
PTCD3-218ENST00000493430 GRASPQ7Z6J2 395 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-218ENST00000493430 GLCCI1Q86VQ1 547 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 Q8NA96 180 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 OR2I1PQ8NGU4 316 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 UROC1Q96N76 676 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 IL17RBQ9NRM6 502 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 RRP7BPQ9NSQ0 103 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 ASB6Q9NWX5 421 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 GPR45Q9Y5Y3 372 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 XRN1Q8IZH2 1706 aaKnown RBP4.31□□□□□ -1.72
PTCD3-218ENST00000493430 NWD1Q149M9 1564 aa4.31□□□□□ -1.72
PTCD3-218ENST00000493430 ADGRL2O95490 1459 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 MARF1Q9Y4F3 1742 aaKnown RBP4.3□□□□□ -1.72
PTCD3-218ENST00000493430 MPPED1O15442 326 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 PRKD3O94806 890 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 SRGNP10124 158 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 HSD3B2P26439 372 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 CTXN1P60606 82 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 SLFN5Q08AF3 891 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 PAPD7Q5XG87 772 aaKnown RBP4.3□□□□□ -1.72
PTCD3-218ENST00000493430 KAZNQ674X7 775 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 VWA1Q6PCB0 445 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 RHOT1Q8IXI2 618 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.3□□□□□ -1.72
PTCD3-218ENST00000493430 WDR66Q8TBY9 1149 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 DPF2Q92785 391 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 TIMP4Q99727 224 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 C11orf54Q9H0W9 315 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-218ENST00000493430 ARPP21Q9UBL0 812 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-218ENST00000493430 INTUQ9ULD6 942 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 FAM135AQ9P2D6 1515 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 PLA2R1Q13018 1463 aa4.3□□□□□ -1.72
PTCD3-218ENST00000493430 ABCA3Q99758 1704 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 WASHC2AQ641Q2 1341 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 A0A1W2PS29 197 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 GPR39O43194 453 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 HAUS5O94927 633 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 FCER1AP12319 257 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 AGXTP21549 392 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 ABCG1P45844 678 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 RPS7P62081 194 aaKnown RBP4.29□□□□□ -1.72
PTCD3-218ENST00000493430 FPGSQ05932 587 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 EPHA10Q5JZY3 1008 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 RNF219Q5W0B1 726 aaPredicted RBP4.29□□□□□ -1.72
PTCD3-218ENST00000493430 KIAA0895LQ68EN5 471 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 LHFPL2Q6ZUX7 228 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 CLNKQ7Z7G1 428 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 SPATS2Q86XZ4 545 aaKnown RBP4.29□□□□□ -1.72
PTCD3-218ENST00000493430 ANKS1AQ92625 1134 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 FBXL20Q96IG2 436 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 SLC2A13Q96QE2 648 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 KMT5AQ9NQR1 393 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 INTS13Q9NVM9 706 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 NEU2Q9Y3R4 380 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 PTPRTO14522 1441 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 ERBINQ96RT1 1412 aa4.29□□□□□ -1.72
PTCD3-218ENST00000493430 SLIT1O75093 1534 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 NEXMIFQ5QGS0 1516 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 LMTK2Q8IWU2 1503 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 LRRC7Q96NW7 1537 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 POLR2AP24928 1970 aaKnown RBP4.28□□□□□ -1.72
PTCD3-218ENST00000493430 PRAMEF33A0A0G2JMD5 474 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 PROM1O43490 865 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 PRAMEF10O60809 474 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 AGFG2O95081 481 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 MTHFD1P11586 935 aaKnown RBP4.28□□□□□ -1.72
PTCD3-218ENST00000493430 KCNA2P16389 499 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 WT1P19544 449 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-218ENST00000493430 GPD1P21695 349 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 CNGA1P29973 690 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 WASP42768 502 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 SRSF4Q08170 494 aaKnown RBP4.28□□□□□ -1.72
PTCD3-218ENST00000493430 ZNF844Q08AG5 666 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 NBPF8Q3BBV2 869 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 UTP14CQ5TAP6 766 aaKnown RBP4.28□□□□□ -1.72
PTCD3-218ENST00000493430 RSPH3Q86UC2 560 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 AMOTL1Q8IY63 956 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 SH2D3CQ8N5H7 860 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 PPM1NQ8N819 430 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 FBXO41Q8TF61 875 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 NRG4Q8WWG1 115 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 TMEM125Q96AQ2 219 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 SLC29A3Q9BZD2 475 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 CPNE5Q9HCH3 593 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 ZNF277Q9NRM2 450 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-218ENST00000493430 SAP30BPQ9UHR5 308 aaKnown RBP4.28□□□□□ -1.72
PTCD3-218ENST00000493430 ENTPD2Q9Y5L3 495 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 SCAF11Q99590 1463 aaKnown RBP4.28□□□□□ -1.72
PTCD3-218ENST00000493430 ARHGAP23Q9P227 1491 aa4.28□□□□□ -1.72
PTCD3-218ENST00000493430 NPHP4O75161 1426 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-218ENST00000493430 COL16A1Q07092 1604 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-218ENST00000493430 NHSL1Q5SYE7 1610 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms