RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 PPP2R3AQ06190 1150 aa14.87□□□□□ -0.03
SAMM50-204ENST00000493161 MYBPC2Q14324 1141 aa14.87□□□□□ -0.03
SAMM50-204ENST00000493161 ARHGAP29Q52LW3 1261 aa14.87□□□□□ -0.03
SAMM50-204ENST00000493161 HYIQ5T013 277 aa14.87□□□□□ -0.03
SAMM50-204ENST00000493161 JADE1Q6IE81 842 aa14.87□□□□□ -0.03
SAMM50-204ENST00000493161 HAUS6Q7Z4H7 955 aa14.87□□□□□ -0.03
SAMM50-204ENST00000493161 WDR5BQ86VZ2 330 aa14.87□□□□□ -0.03
SAMM50-204ENST00000493161 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
SAMM50-204ENST00000493161 CHFRQ96EP1 664 aa14.87□□□□□ -0.03
SAMM50-204ENST00000493161 BICD1Q96G01 975 aa14.87□□□□□ -0.03
SAMM50-204ENST00000493161 SENP8Q96LD8 212 aa14.87□□□□□ -0.03
SAMM50-204ENST00000493161 OXCT2Q9BYC2 517 aaPredicted RBP14.87□□□□□ -0.03
SAMM50-204ENST00000493161 NUP210Q8TEM1 1887 aaPredicted RBP14.86□□□□□ -0.03
SAMM50-204ENST00000493161 OTOL1A6NHN0 477 aaPredicted RBP14.86□□□□□ -0.03
SAMM50-204ENST00000493161 ADRB2P07550 413 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 PLA2G4BP0C869 781 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 HMGN5P82970 282 aaKnown RBP14.86□□□□□ -0.03
SAMM50-204ENST00000493161 SLC39A12Q504Y0 691 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 SPATA1Q5VX52 437 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 SLC39A4Q6P5W5 647 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 C1orf228Q6PIY5 440 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 FAM200AQ8TCP9 573 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 BPIFB1Q8TDL5 484 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 GIPC2Q8TF65 315 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 LRRC15Q8TF66 581 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 SEPT5Q99719 369 aaPredicted RBP14.86□□□□□ -0.03
SAMM50-204ENST00000493161 SLC46A2Q9BY10 475 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 ARRDC1-AS1Q9H2J1 176 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 SMOC1Q9H4F8 434 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 ASB3Q9Y575 518 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 TSC2P49815 1807 aa14.86□□□□□ -0.03
SAMM50-204ENST00000493161 MAP1BP46821 2468 aaKnown RBP14.86□□□□□ -0.03
SAMM50-204ENST00000493161 MYH11P35749 1972 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 CHD8Q9HCK8 2581 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 RALGAPA1Q6GYQ0 2036 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 ANK1P16157 1881 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 LAD1O00515 517 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 NFICP08651 508 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 HOXA6P31267 233 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 LIG4P49917 911 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 ITPRIPL2Q3MIP1 535 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 TMEM119Q4V9L6 283 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 ARHGAP15Q53QZ3 475 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 C9orf57Q5W0N0 161 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 TRIM68Q6AZZ1 485 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 ARMCX5Q6P1M9 558 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 KBTBD6Q86V97 674 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 LRRTM3Q86VH5 581 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 STKLD1Q8NE28 680 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 CHAMP1Q96JM3 812 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 ZCWPW1Q9H0M4 648 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 TASP1Q9H6P5 420 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 RPF1Q9H9Y2 349 aaKnown RBP14.85□□□□□ -0.03
SAMM50-204ENST00000493161 GKN1Q9NS71 199 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 OBP2AQ9NY56 170 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 TBX20Q9UMR3 447 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 CCL26Q9Y258 94 aa14.85□□□□□ -0.03
SAMM50-204ENST00000493161 A0A0B4J269 797 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 VWA3AA6NCI4 1184 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 PIRO00625 290 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 TM4SF5O14894 197 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 HNRNPDLO14979 420 aaKnown RBP14.84□□□□□ -0.03
SAMM50-204ENST00000493161 OGTO15294 1046 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 ODC1P11926 461 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 WEE1P30291 646 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 NMT1P30419 496 aaKnown RBP14.84□□□□□ -0.03
SAMM50-204ENST00000493161 ATP2C1P98194 919 aaPredicted RBP14.84□□□□□ -0.03
SAMM50-204ENST00000493161 MGAT5BQ3V5L5 792 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 AASDHQ4L235 1098 aaPredicted RBP14.84□□□□□ -0.03
SAMM50-204ENST00000493161 N4BP2L1Q5TBK1 243 aaPredicted RBP14.84□□□□□ -0.03
SAMM50-204ENST00000493161 NAIF1Q69YI7 327 aaPredicted RBP14.84□□□□□ -0.03
SAMM50-204ENST00000493161 FSTL4Q6MZW2 842 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 TMEM150AQ86TG1 271 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 ITIH5Q86UX2 942 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 RIN3Q8TB24 985 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 REEP2Q9BRK0 252 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 FBRSL1Q9HCM7 1045 aaKnown RBP14.84□□□□□ -0.03
SAMM50-204ENST00000493161 HPS4Q9NQG7 708 aa14.84□□□□□ -0.03
SAMM50-204ENST00000493161 CPSF3Q9UKF6 684 aaKnown RBP14.84□□□□□ -0.03
SAMM50-204ENST00000493161 CFAP47Q6ZTR5 3102 aa14.83□□□□□ -0.03
SAMM50-204ENST00000493161 ANO9A1A5B4 782 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 TISP43B9A030 160 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 ANKRD63C9JTQ0 380 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 RPP40O75818 363 aaKnown RBP14.83□□□□□ -0.04
SAMM50-204ENST00000493161 FGF19O95750 216 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 PIGRP01833 764 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 CYP11A1P05108 521 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 RAP1GAPP47736 663 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 MCM2P49736 904 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 DHX8Q14562 1220 aaKnown RBP14.83□□□□□ -0.04
SAMM50-204ENST00000493161 TMEM196Q5HYL7 178 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 SYNPOQ8N3V7 929 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 GAB3Q8WWW8 586 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 ZSCAN31Q96LW9 406 aaPredicted RBP14.83□□□□□ -0.04
SAMM50-204ENST00000493161 KIF2CQ99661 725 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 FAM83CQ9BQN1 747 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 MSTO1Q9BUK6 570 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 IKZF4Q9H2S9 585 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 EBF3Q9H4W6 596 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 LARSQ9P2J5 1176 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms