RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 GOLGA8JA6NMD2 632 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 PROB1E7EW31 1015 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 H0Y858 1186 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 TGFB1I1O43294 461 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 FGF19O95750 216 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 SLFN14P0C7P3 912 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 MYL4P12829 197 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 POLR2BP30876 1174 aaKnown RBP12.38□□□□□ -0.43
LRTM1-202ENST00000493075 FAM78AQ5JUQ0 283 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 TANGO2Q6ICL3 276 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 DNAJB7Q7Z6W7 309 aaPredicted RBP12.38□□□□□ -0.43
LRTM1-202ENST00000493075 ITIH5Q86UX2 942 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 DCP1BQ8IZD4 617 aaKnown RBP12.38□□□□□ -0.43
LRTM1-202ENST00000493075 CSGALNACT2Q8N6G5 542 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 DTWD2Q8NBA8 298 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 SPRYD3Q8NCJ5 442 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 GLIS3Q8NEA6 775 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 SPPL2BQ8TCT7 592 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 SMARCD2Q92925 531 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 PSMG2Q969U7 264 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 E2F7Q96AV8 911 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 ASB16Q96NS5 453 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 TMEM209Q96SK2 561 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 KXD1Q9BQD3 176 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 OSBPL6Q9BZF3 934 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 PLA2G2FQ9BZM2 168 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 DNAJC25Q9H1X3 360 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 PDE11AQ9HCR9 933 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 CGNQ9P2M7 1197 aaKnown RBP12.38□□□□□ -0.43
LRTM1-202ENST00000493075 SLC27A5Q9Y2P5 690 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 SIT1Q9Y3P8 196 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 MYH11P35749 1972 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 MUC6Q6W4X9 2439 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 CITO14578 2027 aa12.38□□□□□ -0.43
LRTM1-202ENST00000493075 HUS1O60921 280 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 ITGB3P05106 788 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 RFX1P22670 979 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 CMA1P23946 247 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 FCARP24071 287 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 SNW1Q13573 536 aaKnown RBP12.37□□□□□ -0.43
LRTM1-202ENST00000493075 MLF2Q15773 248 aaPredicted RBP12.37□□□□□ -0.43
LRTM1-202ENST00000493075 DUOXA2Q1HG44 320 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 BMT2Q1RMZ1 405 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 SLC39A12Q504Y0 691 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 DPH6Q7L8W6 267 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 LRRTM3Q86VH5 581 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 TMC8Q8IU68 726 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 CEP57L1Q8IYX8 460 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 TMEM86AQ8N2M4 240 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 SCFD1Q8WVM8 642 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 DNASE1L2Q92874 299 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 ANKRD36BP1Q96IX9 119 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 ZSWIM3Q96MP5 696 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 NELL2Q99435 816 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 ACBD6Q9BR61 282 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 TRPV5Q9NQA5 729 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 INTS13Q9NVM9 706 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 HSPBP1Q9NZL4 362 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 DLGAP2Q9P1A6 1054 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 TRIP11Q15643 1979 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 KANSL1LA0AUZ9 987 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 NRG2O14511 850 aaPredicted RBP12.37□□□□□ -0.43
LRTM1-202ENST00000493075 MYL1P05976 194 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 TMEM191BP0C7N4 346 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 HAPLN1P10915 354 aaPredicted RBP12.37□□□□□ -0.43
LRTM1-202ENST00000493075 WEE1P30291 646 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 NBL1P41271 181 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 LHX1P48742 406 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 TSPY1Q01534 308 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 CUL4BQ13620 913 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 TEAD2Q15562 447 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 NFE2Q16621 373 aaPredicted RBP12.37□□□□□ -0.43
LRTM1-202ENST00000493075 HS2ST1Q7LGA3 356 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 CBWD2Q8IUF1 395 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 WDR49Q8IV35 697 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 C12orf56Q8IXR9 622 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 PDCL2Q8N4E4 241 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 TOP6BLQ8N6T0 577 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 SHKBP1Q8TBC3 707 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 TMEM174Q8WUU8 243 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 DEPDC1BQ8WUY9 529 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 LEO1Q8WVC0 666 aaPredicted RBP12.37□□□□□ -0.43
LRTM1-202ENST00000493075 PHOX2BQ99453 314 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 TRMT61BQ9BVS5 477 aaKnown RBP12.37□□□□□ -0.43
LRTM1-202ENST00000493075 BLZF1Q9H2G9 400 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 AGPAT3Q9NRZ7 376 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 SIX4Q9UIU6 781 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 L1RE1Q9UN81 338 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 ZDHHC9Q9Y397 364 aa12.37□□□□□ -0.43
LRTM1-202ENST00000493075 R3HCC1Q9Y3T6 440 aaKnown RBP12.37□□□□□ -0.43
LRTM1-202ENST00000493075 ZDBF2Q9HCK1 2354 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 WDFY4Q6ZS81 3184 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 FAM237AA0A1B0GTK4 181 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 GABRDO14764 452 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 ACTN4O43707 911 aaKnown RBP12.36□□□□□ -0.43
LRTM1-202ENST00000493075 PRPF40AO75400 957 aaKnown RBP12.36□□□□□ -0.43
LRTM1-202ENST00000493075 TNNC2P02585 160 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 FAM163BP0C2L3 166 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 PSMC3P17980 439 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms