RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 PTPN2P17706 415 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 AVPR2P30518 371 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 GPR17Q13304 367 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 PRSS36Q5K4E3 855 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 CENPPQ6IPU0 288 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 LRRTM3Q86VH5 581 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 NT5DC4Q86YG4 428 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 TMEM105Q8N8V8 129 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 MCRS1Q96EZ8 462 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 KXD1Q9BQD3 176 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 MTMR12Q9C0I1 747 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 DNAJC25Q9H1X3 360 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 GOLPH3LQ9H4A5 285 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 YIPF1Q9Y548 306 aa12.72□□□□□ -0.37
MDC1-207ENST00000492462 PVALEFA0A1B0GWK0 134 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 MED19A0JLT2 244 aaPredicted RBP12.71□□□□□ -0.37
MDC1-207ENST00000492462 KRBA1A5PL33 1030 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 CYP2J2P51589 502 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 NDUFA8P51970 172 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 STK4Q13043 487 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 MYBPC2Q14324 1141 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 SV2CQ496J9 727 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 KMT5BQ4FZB7 885 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 CWF19L1Q69YN2 538 aaKnown RBP12.71□□□□□ -0.37
MDC1-207ENST00000492462 CEP57L1Q8IYX8 460 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 SIX5Q8N196 739 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 CSGALNACT2Q8N6G5 542 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 RDH13Q8NBN7 331 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 KIAA0895Q8NCT3 520 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 GPR152Q8TDT2 470 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 PLA2G2FQ9BZM2 168 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 GZF1Q9H116 711 aaPredicted RBP12.71□□□□□ -0.37
MDC1-207ENST00000492462 AVENQ9NQS1 362 aaPredicted RBP12.71□□□□□ -0.37
MDC1-207ENST00000492462 INTS13Q9NVM9 706 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 FBXL21Q9UKT6 434 aa12.71□□□□□ -0.37
MDC1-207ENST00000492462 ZFP37Q9Y6Q3 630 aaPredicted RBP12.71□□□□□ -0.37
MDC1-207ENST00000492462 GVINP1Q7Z2Y8 2422 aa12.71□□□□□ -0.38
MDC1-207ENST00000492462 ACACBO00763 2458 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 UBE4BO95155 1302 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 FAM237AA0A1B0GTK4 181 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 ZNF233A6NK53 670 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 HCRTO43612 131 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 PI15O43692 258 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 KRT19P08727 400 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 SRFP11831 508 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 MYL4P12829 197 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 PAX3P23760 479 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 GPC5P78333 572 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 BFSP1Q12934 665 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 SNRNP35Q16560 246 aaKnown RBP12.7□□□□□ -0.38
MDC1-207ENST00000492462 CCDC142Q17RM4 750 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 BMT2Q1RMZ1 405 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 SLC39A12Q504Y0 691 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 OSTM1Q86WC4 334 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 FSIP1Q8NA03 581 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 FLCNQ8NFG4 579 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 CACTINQ8WUQ7 758 aaKnown RBP12.7□□□□□ -0.38
MDC1-207ENST00000492462 ATOH1Q92858 354 aaPredicted RBP12.7□□□□□ -0.38
MDC1-207ENST00000492462 NXPE3Q969Y0 559 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 ZNF512Q96ME7 567 aaPredicted RBP12.7□□□□□ -0.38
MDC1-207ENST00000492462 ZSWIM3Q96MP5 696 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 ZNF560Q96MR9 790 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 LRRC3Q9BY71 257 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 OXCT2Q9BYC2 517 aaPredicted RBP12.7□□□□□ -0.38
MDC1-207ENST00000492462 ZCWPW1Q9H0M4 648 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 ZNF334Q9HCZ1 680 aaPredicted RBP12.7□□□□□ -0.38
MDC1-207ENST00000492462 TMLHEQ9NVH6 421 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 CA14Q9ULX7 337 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 MAFFQ9ULX9 164 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 L1RE1Q9UN81 338 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 VPS13AQ96RL7 3174 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 WDR87Q6ZQQ6 2873 aa12.7□□□□□ -0.38
MDC1-207ENST00000492462 KIAA0391O15091 583 aaKnown RBP12.69□□□□□ -0.38
MDC1-207ENST00000492462 TMEM191BP0C7N4 346 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 FCARP24071 287 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 SYKP43405 635 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 EPHA5P54756 1037 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 KNOP1Q1ED39 458 aaKnown RBP12.69□□□□□ -0.38
MDC1-207ENST00000492462 TANGO2Q6ICL3 276 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 PDZD4Q76G19 769 aaPredicted RBP12.69□□□□□ -0.38
MDC1-207ENST00000492462 METTL23Q86XA0 190 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 TMC8Q8IU68 726 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 PDCL2Q8N4E4 241 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 PLEKHO2Q8TD55 490 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 CCDC127Q96BQ5 260 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 CNTNAP3BQ96NU0 1288 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 CNTNAP3Q9BZ76 1288 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 MFSD1Q9H3U5 465 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 ITGA11Q9UKX5 1188 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 DSEQ9UL01 958 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
MDC1-207ENST00000492462 A0A1W2PQ27 194 aa12.68□□□□□ -0.38
MDC1-207ENST00000492462 A0A1W2PQ64 194 aa12.68□□□□□ -0.38
MDC1-207ENST00000492462 A0A1W2PQD8 194 aa12.68□□□□□ -0.38
MDC1-207ENST00000492462 RPN1P04843 607 aaKnown RBP12.68□□□□□ -0.38
MDC1-207ENST00000492462 DLATP10515 647 aaKnown RBP12.68□□□□□ -0.38
MDC1-207ENST00000492462 ATF6P18850 670 aa12.68□□□□□ -0.38
MDC1-207ENST00000492462 ACAT1P24752 427 aaKnown RBP12.68□□□□□ -0.38
MDC1-207ENST00000492462 PNPLA4P41247 253 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms