RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 COPS2P61201 443 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 TGFB2P61812 414 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 MGAT5Q09328 741 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 ZNF268Q14587 947 aaPredicted RBP17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 MTFR1Q15390 333 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 LRRC38Q5VT99 294 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 SPOCD1Q6ZMY3 1216 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 TRABD2AQ86V40 505 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 PNMA8AQ86V59 439 aaPredicted RBP17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 RXFP1Q9HBX9 757 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 PNMA3Q9UL41 463 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 LOC285556D6RIA3 1793 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 EXOC1LA0A1B0GW35 172 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 ASS1P00966 412 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 CST3P01034 146 aaPredicted RBP17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 PECAM1P16284 738 aaPredicted RBP17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 MCL1Q07820 350 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 FASTKD3Q14CZ7 662 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 TXNRD3NBQ6F5E7 133 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 SLC7A3Q8WY07 619 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 C12orf42Q96LP6 360 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 MCEEQ96PE7 176 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 TEX13BQ9BXU2 312 aa17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 NIFKQ9BYG3 293 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-220ENST00000492386 TTLL13PA6NNM8 815 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 CALB1P05937 261 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 PTPN7P35236 360 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 FSTL1Q12841 308 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 GPS1Q13098 491 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 E2F5Q15329 346 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 TDRPQ86YL5 185 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 ANKLE1Q8NAG6 615 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 MYCBPQ99417 103 aaPredicted RBP17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 TACO1Q9BSH4 297 aaKnown RBP17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 TMEM134Q9H6X4 195 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 AS3MTQ9HBK9 375 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 GEMIN8Q9NWZ8 242 aaKnown RBP17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 HACL1Q9UJ83 578 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 DRG1Q9Y295 367 aaKnown RBP17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 hCG_1818297A0A087WSY0 165 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 IGF2BP3O00425 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 LSM8O95777 96 aaKnown RBP17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 HARSP12081 509 aaKnown RBP17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 NR1H3Q13133 447 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 CAPSQ13938 189 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 NEDD9Q14511 834 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 OASLQ15646 514 aaKnown RBP17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 PPP1R15BQ5SWA1 713 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 ZFYVE27Q5T4F4 411 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 RNF43Q68DV7 783 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 SAMD7Q7Z3H4 446 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 DENND1AQ8TEH3 1009 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 ACSF2Q96CM8 615 aaPredicted RBP17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 TTC25Q96NG3 672 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 ZNF112Q9UJU3 913 aa17.03■□□□□ 0.32
SEMA4D-220ENST00000492386 FAM189A1O60320 539 aa17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 ASMTLO95671 621 aa17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 BRD2P25440 801 aaKnown RBP17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 ICAM3P32942 547 aa17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 TNFSF9P41273 254 aa17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 VCPP55072 806 aaKnown RBP17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 IL9RQ01113 521 aa17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 ACVR2BQ13705 512 aa17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 WDR72Q3MJ13 1102 aa17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 HP1BP3Q5SSJ5 553 aaPredicted RBP17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 RNASEH2BQ5TBB1 312 aaKnown RBP17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 DNAJC24Q6P3W2 148 aa17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 BRSK2Q8IWQ3 736 aa17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 NKD2Q969F2 451 aaPredicted RBP17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 CAMKK2Q96RR4 588 aa17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 UBN1Q9NPG3 1134 aa17.02■□□□□ 0.32
SEMA4D-220ENST00000492386 IGKV6D-21A0A0A0MT36 114 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 SPAG7O75391 227 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 CDKN2BP42772 138 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 ALDH5A1P51649 535 aaPredicted RBP17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 EN1Q05925 392 aaPredicted RBP17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 MORF4L2Q15014 288 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 ASRGL1Q7L266 308 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 RPAINQ86UA6 219 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 ECHDC2Q86YB7 292 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 WDTC1Q8N5D0 677 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 JDP2Q8WYK2 163 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 GRAMD1AQ96CP6 724 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 IMPG2Q9BZV3 1241 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 PICK1Q9NRD5 415 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 KLHL14Q9P2G3 628 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 FZD1Q9UP38 647 aa17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.02■□□□□ 0.31
SEMA4D-220ENST00000492386 MAGEB2O15479 319 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 PRPF4O43172 522 aaKnown RBP eCLIP17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 ADCY3O60266 1144 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 ALADP13716 330 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 EZRP15311 586 aaKnown RBP17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 MYL6P60660 151 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 TARBP2Q15633 366 aaKnown RBP17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 TFDP3Q5H9I0 405 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 ZNF772Q68DY9 489 aaPredicted RBP17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 DCUN1D2Q6PH85 259 aa17.01■□□□□ 0.31
SEMA4D-220ENST00000492386 CATSPERGQ6ZRH7 1159 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms