RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 NPAS3Q8IXF0 933 aa26.57■■□□□ 1.84
UPF3A-209ENST00000492270 HS6ST3Q8IZP7 471 aa26.57■■□□□ 1.84
UPF3A-209ENST00000492270 CCDC127Q96BQ5 260 aa26.57■■□□□ 1.84
UPF3A-209ENST00000492270 ZCWPW1Q9H0M4 648 aa26.57■■□□□ 1.84
UPF3A-209ENST00000492270 MRPS23Q9Y3D9 190 aaKnown RBP26.57■■□□□ 1.84
UPF3A-209ENST00000492270 EXOC3O60645 756 aa26.56■■□□□ 1.84
UPF3A-209ENST00000492270 RHOBTB3O94955 611 aa26.56■■□□□ 1.84
UPF3A-209ENST00000492270 CEBPBP17676 345 aa26.56■■□□□ 1.84
UPF3A-209ENST00000492270 DUOXA2Q1HG44 320 aa26.56■■□□□ 1.84
UPF3A-209ENST00000492270 FMR1NBQ8N0W7 255 aaPredicted RBP26.56■■□□□ 1.84
UPF3A-209ENST00000492270 PDCL2Q8N4E4 241 aa26.56■■□□□ 1.84
UPF3A-209ENST00000492270 PLEKHO2Q8TD55 490 aa26.56■■□□□ 1.84
UPF3A-209ENST00000492270 TCEAL4Q96EI5 215 aa26.56■■□□□ 1.84
UPF3A-209ENST00000492270 CGRRF1Q99675 332 aa26.56■■□□□ 1.84
UPF3A-209ENST00000492270 DUSP12Q9UNI6 340 aa26.56■■□□□ 1.84
UPF3A-209ENST00000492270 SNX9Q9Y5X1 595 aa26.56■■□□□ 1.84
UPF3A-209ENST00000492270 NUMBLQ9Y6R0 609 aa26.56■■□□□ 1.84
UPF3A-209ENST00000492270 ANHXE9PGG2 379 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 SOAT2O75908 522 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 TNNI1P19237 187 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 CCR2P41597 374 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 PRSS36Q5K4E3 855 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 PARM1Q6UWI2 310 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 LRRTM3Q86VH5 581 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 THEM5Q8N1Q8 247 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 GOLGA5Q8TBA6 731 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 FGF14Q92915 247 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 MFSD14AQ96MC6 490 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 FNBP1Q96RU3 617 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 RPP25Q9BUL9 199 aaKnown RBP26.55■■□□□ 1.84
UPF3A-209ENST00000492270 DNAJC25Q9H1X3 360 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 HCN4Q9Y3Q4 1203 aa26.55■■□□□ 1.84
UPF3A-209ENST00000492270 ZFP37Q9Y6Q3 630 aaPredicted RBP26.55■■□□□ 1.84
UPF3A-209ENST00000492270 ZDBF2Q9HCK1 2354 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 GOLGA6L4A6NEF3 574 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 HUS1O60921 280 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 CASP4P49662 377 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 TRAPPC11Q7Z392 1133 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 OSTM1Q86WC4 334 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 ELMOD1Q8N336 334 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 SLC44A3Q8N4M1 653 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 ZNF516Q92618 1163 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 ZNF512Q96ME7 567 aaPredicted RBP26.54■■□□□ 1.84
UPF3A-209ENST00000492270 AVENQ9NQS1 362 aaPredicted RBP26.54■■□□□ 1.84
UPF3A-209ENST00000492270 DMAC2Q9NW81 257 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 GDAP2Q9NXN4 497 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 MAPK8IP1Q9UQF2 711 aa26.54■■□□□ 1.84
UPF3A-209ENST00000492270 OBSL1O75147 1896 aa26.53■■□□□ 1.84
UPF3A-209ENST00000492270 DENND4CQ5VZ89 1909 aa26.53■■□□□ 1.84
UPF3A-209ENST00000492270 PDXKO00764 312 aa26.53■■□□□ 1.84
UPF3A-209ENST00000492270 HCRTO43612 131 aa26.53■■□□□ 1.84
UPF3A-209ENST00000492270 PNOCQ13519 176 aa26.53■■□□□ 1.84
UPF3A-209ENST00000492270 SNW1Q13573 536 aaKnown RBP26.53■■□□□ 1.84
UPF3A-209ENST00000492270 ENGASEQ8NFI3 743 aa26.53■■□□□ 1.84
UPF3A-209ENST00000492270 CCDC47Q96A33 483 aaKnown RBP26.53■■□□□ 1.84
UPF3A-209ENST00000492270 MCRS1Q96EZ8 462 aa26.53■■□□□ 1.84
UPF3A-209ENST00000492270 HPDLQ96IR7 371 aa26.53■■□□□ 1.84
UPF3A-209ENST00000492270 TMLHEQ9NVH6 421 aa26.53■■□□□ 1.84
UPF3A-209ENST00000492270 PTPRDP23468 1912 aa26.53■■□□□ 1.84
UPF3A-209ENST00000492270 CST3P01034 146 aaPredicted RBP26.52■■□□□ 1.84
UPF3A-209ENST00000492270 NR3C1P04150 777 aa26.52■■□□□ 1.84
UPF3A-209ENST00000492270 ACAT1P24752 427 aaKnown RBP26.52■■□□□ 1.84
UPF3A-209ENST00000492270 MYO1EQ12965 1108 aa26.52■■□□□ 1.84
UPF3A-209ENST00000492270 KCNB1Q14721 858 aa26.52■■□□□ 1.84
UPF3A-209ENST00000492270 IQCEQ6IPM2 695 aa26.52■■□□□ 1.84
UPF3A-209ENST00000492270 WDFY4Q6ZS81 3184 aa26.52■■□□□ 1.84
UPF3A-209ENST00000492270 PDZD4Q76G19 769 aaPredicted RBP26.52■■□□□ 1.84
UPF3A-209ENST00000492270 FBXL6Q8N531 539 aa26.52■■□□□ 1.84
UPF3A-209ENST00000492270 NXPE3Q969Y0 559 aa26.52■■□□□ 1.84
UPF3A-209ENST00000492270 DDX43Q9NXZ2 648 aaKnown RBP26.52■■□□□ 1.84
UPF3A-209ENST00000492270 R3HCC1Q9Y3T6 440 aaKnown RBP26.52■■□□□ 1.84
UPF3A-209ENST00000492270 MOSPD3O75425 235 aa26.51■■□□□ 1.83
UPF3A-209ENST00000492270 MYL4P12829 197 aa26.51■■□□□ 1.83
UPF3A-209ENST00000492270 GJA1P17302 382 aa26.51■■□□□ 1.83
UPF3A-209ENST00000492270 CCDC142Q17RM4 750 aa26.51■■□□□ 1.83
UPF3A-209ENST00000492270 SOWAHAQ2M3V2 549 aa26.51■■□□□ 1.83
UPF3A-209ENST00000492270 SLC9A9Q8IVB4 645 aa26.51■■□□□ 1.83
UPF3A-209ENST00000492270 ADGRF2Q8IZF7 708 aa26.51■■□□□ 1.83
UPF3A-209ENST00000492270 TMEM86AQ8N2M4 240 aa26.51■■□□□ 1.83
UPF3A-209ENST00000492270 TOP6BLQ8N6T0 577 aa26.51■■□□□ 1.83
UPF3A-209ENST00000492270 SEPT5Q99719 369 aaPredicted RBP26.51■■□□□ 1.83
UPF3A-209ENST00000492270 ASAH2Q9NR71 780 aa26.51■■□□□ 1.83
UPF3A-209ENST00000492270 LRRIQ3A6PVS8 624 aaPredicted RBP26.5■■□□□ 1.83
UPF3A-209ENST00000492270 PRPF40AO75400 957 aaKnown RBP26.5■■□□□ 1.83
UPF3A-209ENST00000492270 CFHP08603 1231 aa26.5■■□□□ 1.83
UPF3A-209ENST00000492270 ALDH1A3P47895 512 aa26.5■■□□□ 1.83
UPF3A-209ENST00000492270 EPHB3P54753 998 aa26.5■■□□□ 1.83
UPF3A-209ENST00000492270 EPHA5P54756 1037 aa26.5■■□□□ 1.83
UPF3A-209ENST00000492270 VCPP55072 806 aaKnown RBP26.5■■□□□ 1.83
UPF3A-209ENST00000492270 FAM160A1Q05DH4 1040 aa26.5■■□□□ 1.83
UPF3A-209ENST00000492270 PLD1Q13393 1074 aa26.5■■□□□ 1.83
UPF3A-209ENST00000492270 CYP4A22Q5TCH4 519 aa26.5■■□□□ 1.83
UPF3A-209ENST00000492270 TMC8Q8IU68 726 aa26.5■■□□□ 1.83
UPF3A-209ENST00000492270 SUGP1Q8IWZ8 645 aaKnown RBP26.5■■□□□ 1.83
UPF3A-209ENST00000492270 SMYD4Q8IYR2 804 aaPredicted RBP26.5■■□□□ 1.83
UPF3A-209ENST00000492270 ERCC4Q92889 916 aaPredicted RBP26.5■■□□□ 1.83
UPF3A-209ENST00000492270 KXD1Q9BQD3 176 aa26.5■■□□□ 1.83
UPF3A-209ENST00000492270 LRRC3Q9BY71 257 aa26.5■■□□□ 1.83
UPF3A-209ENST00000492270 ABI2Q9NYB9 513 aaPredicted RBP26.5■■□□□ 1.83
UPF3A-209ENST00000492270 COL4A3Q01955 1670 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms