RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 HAUS3Q68CZ6 603 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 RNF19BQ6ZMZ0 732 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 USP37Q86T82 979 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 TMC8Q8IU68 726 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 TBC1D32Q96NH3 1257 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 GCNAQ96QF7 691 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 MTMR9Q96QG7 549 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 LRRC3Q9BY71 257 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 ATXN3LQ9H3M9 355 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 TMEM134Q9H6X4 195 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 HSFX1Q9UBD0 423 aa12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 SPTAN1Q13813 2472 aaKnown RBP12.16□□□□□ -0.46
CLCNKA-206ENST00000491433 SDK1Q7Z5N4 2213 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 NCANO14594 1321 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 ACACAQ13085 2346 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 A0A087WWV3 80 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 CAVIN2O95810 425 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 PAX3P23760 479 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 CDC25CP30307 473 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 RDXP35241 583 aaKnown RBP12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 OSTNP61366 133 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 NR5A1Q13285 461 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 GPR17Q13304 367 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 TMEM196Q5HYL7 178 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 EARS2Q5JPH6 523 aaKnown RBP12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 GPR158Q5T848 1215 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 ZNF843Q8N446 348 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 CCDC26Q8TAB7 109 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 PSMG2Q969U7 264 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 RSPRY1Q96DX4 576 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 ACO2Q99798 780 aaKnown RBP12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 TCHPQ9BT92 498 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 CDT1Q9H211 546 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 CCDC86Q9H6F5 360 aaKnown RBP12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 C2orf42Q9NWW7 574 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 USP20Q9Y2K6 914 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 EML5Q05BV3 1969 aa12.15□□□□□ -0.46
CLCNKA-206ENST00000491433 BCLAF3A2AJT9 711 aaKnown RBP12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 CAPN8A6NHC0 703 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 M0QZQ0 153 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 TRDMT1O14717 391 aaKnown RBP12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 KHNYNO15037 678 aaKnown RBP12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 ATXN7O15265 892 aaPredicted RBP12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 XPOTO43592 962 aaKnown RBP12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 MED24O75448 989 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 EDN1P05305 212 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 DRD1P21728 446 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 GABRR2P28476 465 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 PXNP49023 591 aaPredicted RBP12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 CREB5Q02930 508 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 KCNC4Q03721 635 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 SCRN1Q12765 414 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 SCAPQ12770 1279 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 DUSP4Q13115 394 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 TRIM29Q14134 588 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 MYBPC2Q14324 1141 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 VEPH1Q14D04 833 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 WDR44Q5JSH3 913 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 TTC8Q8TAM2 541 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 TNFRSF25Q93038 417 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 ACDQ96AP0 544 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 ZMAT2Q96NC0 199 aaKnown RBP12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 DUSP15Q9H1R2 295 aaPredicted RBP12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 TASP1Q9H6P5 420 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 PTPRHQ9HD43 1115 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 TMEM9BQ9NQ34 198 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 PDRG1Q9NUG6 133 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 ORC3Q9UBD5 711 aaPredicted RBP12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 KCNG1Q9UIX4 513 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 STK24Q9Y6E0 443 aa12.14□□□□□ -0.47
CLCNKA-206ENST00000491433 NUP205Q92621 2012 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 DOPEY1Q5JWR5 2465 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 FAM221BA6H8Z2 402 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 FAM205CA6NFA0 338 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 CCDC169A6NNP5 214 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 H0Y626 953 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 EIF5BO60841 1220 aaKnown RBP12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 TRIM16O95361 564 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 TUFMP49411 452 aaKnown RBP12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 DMP1Q13316 513 aaPredicted RBP12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 ORC2Q13416 577 aaPredicted RBP12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 RUNX3Q13761 415 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 TAF12Q16514 161 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 ARMCX5Q6P1M9 558 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 MPZL3Q6UWV2 235 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 GAREM2Q75VX8 874 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 DNAJB7Q7Z6W7 309 aaPredicted RBP12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 CEP120Q8N960 986 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 LSM14AQ8ND56 463 aaKnown RBP12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 SPATA18Q8TC71 538 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 ZFYVE19Q96K21 471 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 TSPAN18Q96SJ8 248 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 KIFC3Q9BVG8 833 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 DNAJC25Q9H1X3 360 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 SMOC1Q9H4F8 434 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 SLC32A1Q9H598 525 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 KIF9Q9HAQ2 790 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 PLEKHA5Q9HAU0 1116 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms